RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 NKX2-6A6NCS4 301 aa16.52■□□□□ 0.23
RTN4-201ENST00000317610 RBFOX3A6NFN3 312 aa16.52■□□□□ 0.23
RTN4-201ENST00000317610 FAM24AA6NFZ4 105 aa16.52■□□□□ 0.23
RTN4-201ENST00000317610 NRASP01111 189 aa16.52■□□□□ 0.23
RTN4-201ENST00000317610 DSCR4P56555 118 aaPredicted RBP16.52■□□□□ 0.23
RTN4-201ENST00000317610 CCL20P78556 96 aa16.52■□□□□ 0.23
RTN4-201ENST00000317610 PCOLCEQ15113 449 aa16.52■□□□□ 0.23
RTN4-201ENST00000317610 MRPL14Q6P1L8 145 aaKnown RBP16.52■□□□□ 0.23
RTN4-201ENST00000317610 OR2G3Q8NGZ4 309 aa16.52■□□□□ 0.23
RTN4-201ENST00000317610 OR14L1PQ8NHC6 308 aa16.52■□□□□ 0.23
RTN4-201ENST00000317610 EDARADDQ8WWZ3 215 aa16.52■□□□□ 0.23
RTN4-201ENST00000317610 ABHD14BQ96IU4 210 aa16.52■□□□□ 0.23
RTN4-201ENST00000317610 UNKLQ9H9P5 680 aaKnown RBP16.52■□□□□ 0.23
RTN4-201ENST00000317610 ZNF391Q9UJN7 358 aa16.52■□□□□ 0.23
RTN4-201ENST00000317610 ST3GAL6Q9Y274 331 aa16.52■□□□□ 0.23
RTN4-201ENST00000317610 PUS1Q9Y606 427 aaKnown RBP eCLIP16.52■□□□□ 0.23
RTN4-201ENST00000317610 SHANK1Q9Y566 2161 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 OR6C6A6NF89 314 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 BCAT2O15382 392 aaPredicted RBP16.51■□□□□ 0.23
RTN4-201ENST00000317610 PPYP01298 95 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 ACER2Q5QJU3 275 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 ZNF774Q6NX45 483 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 TMEM56Q96MV1 263 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 TMEM222Q9H0R3 208 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 PROK2Q9HC23 129 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 KIAA1456Q9P272 454 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 TINAGQ9UJW2 476 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 TCFL5Q9UL49 500 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 TMEM56-RWDD3S4R434 201 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 LCATP04180 440 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 TCN2P20062 427 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 ASCL1P50553 236 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 MALLQ13021 153 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 RAET1LQ5VY80 246 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 MEX3BQ6ZN04 569 aaKnown RBP16.51■□□□□ 0.23
RTN4-201ENST00000317610 PLEKHF2Q9H8W4 249 aa16.51■□□□□ 0.23
RTN4-201ENST00000317610 A0A087WWC5 75 aa16.5■□□□□ 0.23
RTN4-201ENST00000317610 A0A1B0GV50 99 aa16.5■□□□□ 0.23
RTN4-201ENST00000317610 ZNF724A8MTY0 619 aa16.5■□□□□ 0.23
RTN4-201ENST00000317610 GPR37O15354 613 aa16.5■□□□□ 0.23
RTN4-201ENST00000317610 HOXA5P20719 270 aa16.5■□□□□ 0.23
RTN4-201ENST00000317610 NKX2-1P43699 371 aaPredicted RBP16.5■□□□□ 0.23
RTN4-201ENST00000317610 FUT6P51993 359 aa16.5■□□□□ 0.23
RTN4-201ENST00000317610 RBM11P57052 281 aaKnown RBP16.5■□□□□ 0.23
RTN4-201ENST00000317610 DAZAP2Q15038 168 aaPredicted RBP16.5■□□□□ 0.23
RTN4-201ENST00000317610 POM121Q96HA1 1249 aa16.5■□□□□ 0.23
RTN4-201ENST00000317610 SF3B5Q9BWJ5 86 aaKnown RBP16.5■□□□□ 0.23
RTN4-201ENST00000317610 LYRM2Q9NU23 88 aaPredicted RBP16.5■□□□□ 0.23
RTN4-201ENST00000317610 LOC102723996A0A087X1L8 192 aa16.5■□□□□ 0.23
RTN4-201ENST00000317610 A0A0J9YW62 118 aa16.5■□□□□ 0.23
RTN4-201ENST00000317610 SRP19P09132 144 aaKnown RBP16.5■□□□□ 0.23
RTN4-201ENST00000317610 HTR5AP47898 357 aa16.5■□□□□ 0.23
RTN4-201ENST00000317610 NOVA1P51513 510 aaKnown RBP16.5■□□□□ 0.23
RTN4-201ENST00000317610 LINC00469Q8N7U9 141 aa16.5■□□□□ 0.23
RTN4-201ENST00000317610 TMEM171Q8WVE6 324 aa16.5■□□□□ 0.23
RTN4-201ENST00000317610 SPIN2AQ99865 258 aa16.5■□□□□ 0.23
RTN4-201ENST00000317610 SPIN2BQ9BPZ2 258 aa16.5■□□□□ 0.23
RTN4-201ENST00000317610 ABHD14AQ9BUJ0 271 aa16.5■□□□□ 0.23
RTN4-201ENST00000317610 HIPK2Q9H2X6 1198 aa16.5■□□□□ 0.23
RTN4-201ENST00000317610 CABIN1Q9Y6J0 2220 aa16.49■□□□□ 0.23
RTN4-201ENST00000317610 LAMA1P25391 3075 aa16.49■□□□□ 0.23
RTN4-201ENST00000317610 hCG_38984A0A1B0GV85 526 aa16.49■□□□□ 0.23
RTN4-201ENST00000317610 ZNF732B4DXR9 585 aa16.49■□□□□ 0.23
RTN4-201ENST00000317610 HSD17B6O14756 317 aa16.49■□□□□ 0.23
RTN4-201ENST00000317610 FBP1P09467 338 aa16.49■□□□□ 0.23
RTN4-201ENST00000317610 RND3P61587 244 aa16.49■□□□□ 0.23
RTN4-201ENST00000317610 Q6ZS49 121 aa16.49■□□□□ 0.23
RTN4-201ENST00000317610 MR1Q95460 341 aa16.49■□□□□ 0.23
RTN4-201ENST00000317610 SRXN1Q9BYN0 137 aa16.49■□□□□ 0.23
RTN4-201ENST00000317610 SLC25A31Q9H0C2 315 aa16.49■□□□□ 0.23
RTN4-201ENST00000317610 TMEM38BQ9NVV0 291 aa16.49■□□□□ 0.23
RTN4-201ENST00000317610 CA14Q9ULX7 337 aa16.49■□□□□ 0.23
RTN4-201ENST00000317610 RFNGQ9Y644 331 aa16.49■□□□□ 0.23
RTN4-201ENST00000317610 IGHV5-10-1A0A0J9YXX1 117 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 A0A1W2PQM1 296 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 CLEC18AA5D8T8 446 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 H3BQ15 152 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 CCL3P10147 92 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 FUT3P21217 361 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 GNRHRP30968 328 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 PRSS12P56730 875 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 RAC1P63000 192 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 NCMAPQ5T1S8 102 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 TMEM252Q8N6L7 170 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 CLEC18CQ8NCF0 446 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 AKR7LQ8NHP1 331 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 PAPOLGQ9BWT3 736 aaKnown RBP16.48■□□□□ 0.23
RTN4-201ENST00000317610 SH2D2AQ9NP31 389 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 TNFSF11O14788 317 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 DNPH1O43598 174 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 CELA2AP08217 269 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 DPPA2Q7Z7J5 298 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 ODF3L1Q8IXM7 274 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 SELENOHQ8IZQ5 122 aaKnown RBP16.48■□□□□ 0.23
RTN4-201ENST00000317610 RAB39BQ96DA2 213 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 AKIRIN1Q9H9L7 192 aaPredicted RBP16.48■□□□□ 0.23
RTN4-201ENST00000317610 DKKL1Q9UK85 242 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 SLC7A11Q9UPY5 501 aa16.48■□□□□ 0.23
RTN4-201ENST00000317610 CDRT15L2A8MXV6 281 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms