RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 PBOV1Q9GZY1 135 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 SH2D2AQ9NP31 389 aa10.79□□□□□ -0.68
PCF11-201ENST00000298281 GAGE10A6NGK3 116 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 LILRA5A6NI73 299 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 P01737 135 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 B4GALT1P15291 398 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 WDR25Q64LD2 544 aaPredicted RBP10.78□□□□□ -0.68
PCF11-201ENST00000298281 BCDIN3DQ7Z5W3 292 aaKnown RBP10.78□□□□□ -0.68
PCF11-201ENST00000298281 GEMIN7Q9H840 131 aaKnown RBP10.78□□□□□ -0.68
PCF11-201ENST00000298281 OR6C3Q9NZP0 311 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 NAT8Q9UHE5 227 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 PHF3Q92576 2039 aaKnown RBP10.78□□□□□ -0.68
PCF11-201ENST00000298281 MT-CO3P00414 261 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 CDK5R1Q15078 307 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 MAFAQ8NHW3 353 aaPredicted RBP10.78□□□□□ -0.68
PCF11-201ENST00000298281 BEX4Q9NWD9 120 aaPredicted RBP10.78□□□□□ -0.68
PCF11-201ENST00000298281 ZGLP1P0C6A0 271 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 VDAC1P21796 283 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 DSCR4P56555 118 aaPredicted RBP10.78□□□□□ -0.68
PCF11-201ENST00000298281 EIF3IQ13347 325 aaKnown RBP10.78□□□□□ -0.68
PCF11-201ENST00000298281 ELOBQ15370 118 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 STAC2Q6ZMT1 411 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 OR10J6PQ8NGY7 276 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 METTL26Q96S19 204 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 PRR14Q9BWN1 585 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 INSIG2Q9Y5U4 225 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 SPRY1O43609 319 aaPredicted RBP10.78□□□□□ -0.68
PCF11-201ENST00000298281 CST2P09228 141 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 LIMS3P0CW19 117 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 LIMS4P0CW20 117 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 CD37P11049 281 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 MGMTP16455 207 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 KLF3P57682 345 aaPredicted RBP10.78□□□□□ -0.68
PCF11-201ENST00000298281 PRNTQ86SH4 94 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 OR52N4Q8NGI2 321 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 SCN5AQ14524 2016 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 ICOSLGO75144 302 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 ZNF735P0CB33 412 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 LHX8Q68G74 356 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 CA13Q8N1Q1 262 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 ARRDC1Q8N5I2 433 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 PHLDA1Q8WV24 401 aaPredicted RBP10.78□□□□□ -0.68
PCF11-201ENST00000298281 SPSB1Q96BD6 273 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 EDA2RQ9HAV5 297 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 CHST2Q9Y4C5 530 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 ABCA4P78363 2273 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 DHHO43323 396 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 JOSD1Q15040 202 aaPredicted RBP10.78□□□□□ -0.68
PCF11-201ENST00000298281 Q6ZNX1 250 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 MAVSQ7Z434 540 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 RBM45Q8IUH3 476 aaKnown RBP10.78□□□□□ -0.68
PCF11-201ENST00000298281 SNRNP40Q96DI7 357 aaKnown RBP10.78□□□□□ -0.68
PCF11-201ENST00000298281 MS4A10Q96PG2 267 aa10.78□□□□□ -0.68
PCF11-201ENST00000298281 TMSB15BA0A087X1C1 80 aa10.77□□□□□ -0.68
PCF11-201ENST00000298281 SOCS7O14512 581 aa10.77□□□□□ -0.68
PCF11-201ENST00000298281 CXCL13O43927 109 aa10.77□□□□□ -0.68
PCF11-201ENST00000298281 HTN3P15516 51 aa10.77□□□□□ -0.68
PCF11-201ENST00000298281 YBX1P67809 324 aaKnown RBP10.77□□□□□ -0.68
PCF11-201ENST00000298281 DNLZQ5SXM8 178 aa10.77□□□□□ -0.68
PCF11-201ENST00000298281 RTN4RL1Q86UN2 441 aaPredicted RBP10.77□□□□□ -0.68
PCF11-201ENST00000298281 BPIFA4PQ86YQ2 179 aa10.77□□□□□ -0.68
PCF11-201ENST00000298281 C10orf126Q8N4M7 172 aa10.77□□□□□ -0.68
PCF11-201ENST00000298281 TMEM251Q8N6I4 163 aa10.77□□□□□ -0.68
PCF11-201ENST00000298281 OR2V1Q8NHB1 315 aa10.77□□□□□ -0.68
PCF11-201ENST00000298281 SLC45A2Q9UMX9 530 aa10.77□□□□□ -0.68
PCF11-201ENST00000298281 COL16A1Q07092 1604 aaPredicted RBP10.77□□□□□ -0.68
PCF11-201ENST00000298281 TRAV1-2A0A0B4J238 106 aa10.77□□□□□ -0.68
PCF11-201ENST00000298281 LMO7DNF2Z398 122 aa10.77□□□□□ -0.68
PCF11-201ENST00000298281 COMPP49747 757 aaPredicted RBP10.77□□□□□ -0.68
PCF11-201ENST00000298281 RHBDD2Q6NTF9 364 aa10.77□□□□□ -0.68
PCF11-201ENST00000298281 TMEM183AQ8IXX5 376 aa10.77□□□□□ -0.68
PCF11-201ENST00000298281 SSC4DQ8WTU2 575 aa10.77□□□□□ -0.68
PCF11-201ENST00000298281 PSG11Q9UQ72 335 aa10.77□□□□□ -0.68
PCF11-201ENST00000298281 CCL27Q9Y4X3 112 aa10.77□□□□□ -0.68
PCF11-201ENST00000298281 RGPD2P0DJD1 1756 aa10.77□□□□□ -0.68
PCF11-201ENST00000298281 K7ESM1 405 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 RPL29P47914 159 aaKnown RBP10.77□□□□□ -0.69
PCF11-201ENST00000298281 BAP18Q8IXM2 172 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 TMEM99Q8N816 258 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 AKR7LQ8NHP1 331 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 MRGPRX1Q96LB2 322 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 TEX37Q96LM6 180 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 SLCO1C1Q9NYB5 712 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 PHIPQ8WWQ0 1821 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 TCRBV5S1A1TA0A578 114 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 POM121BA6NF01 834 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 EVX1P49640 407 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 TMEM128Q5BJH2 165 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 C12orf57Q99622 126 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 DCTN5Q9BTE1 182 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 TRAV17A0A0B4J275 112 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 RAB29O14966 203 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 NUBP1P53384 320 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 LYG2Q86SG7 212 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 GPR137Q96N19 417 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 VGLL1Q99990 258 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 TECRQ9NZ01 308 aaKnown RBP10.77□□□□□ -0.69
PCF11-201ENST00000298281 IL4P05112 153 aa10.77□□□□□ -0.69
PCF11-201ENST00000298281 GP2P55259 537 aaKnown RBP10.77□□□□□ -0.69
PCF11-201ENST00000298281 TRA2AQ13595 282 aaKnown RBP eCLIP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms