RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 ZIC1Q15915 447 aa10.22□□□□□ -0.77
LAMA4-201ENST00000230538 PDPNQ86YL7 162 aa10.22□□□□□ -0.77
LAMA4-201ENST00000230538 FAM24BQ8N5W8 94 aa10.22□□□□□ -0.77
LAMA4-201ENST00000230538 ZNF71Q9NQZ8 489 aaPredicted RBP10.22□□□□□ -0.77
LAMA4-201ENST00000230538 SIPA1L3O60292 1781 aaPredicted RBP10.22□□□□□ -0.77
LAMA4-201ENST00000230538 COL18A1P39060 1754 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 TRAV38-1A0A0B4J264 116 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 OOEPA6NGQ2 149 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 HMGA2P52926 109 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 LILRA6Q6PI73 481 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 TIPARPQ7Z3E1 657 aaKnown RBP10.21□□□□□ -0.77
LAMA4-201ENST00000230538 RAB1CQ92928 201 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 ADTRPQ96IZ2 230 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 COA4Q9NYJ1 87 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 A0A1W2PRD5 423 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 A0A1W2PRF3 423 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 A0A1W2PRM7 423 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 CD3EP07766 207 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 BCL3P20749 454 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 PRSS12P56730 875 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 VN1R4Q7Z5H5 301 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 COX14Q96I36 57 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 FAM210BQ96KR6 192 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 RNF2Q99496 336 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 LHX9Q9NQ69 397 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 FSCN3Q9NQT6 498 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 LYRM2Q9NU23 88 aaPredicted RBP10.21□□□□□ -0.77
LAMA4-201ENST00000230538 MRM2Q9UI43 246 aaKnown RBP10.21□□□□□ -0.77
LAMA4-201ENST00000230538 UFC1Q9Y3C8 167 aa10.21□□□□□ -0.77
LAMA4-201ENST00000230538 TMPRSS2O15393 492 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 SPINK2P20155 84 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 RPS4Y1P22090 263 aaKnown RBP10.21□□□□□ -0.78
LAMA4-201ENST00000230538 LGALS7P47929 136 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 SKP2Q13309 424 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 WDR73Q6P4I2 378 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 R3HDM4Q96D70 268 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 MS4A10Q96PG2 267 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 ABHD14AQ9BUJ0 271 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 GLRX2Q9NS18 164 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 GPR27Q9NS67 375 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 YBX2Q9Y2T7 364 aaKnown RBP10.21□□□□□ -0.78
LAMA4-201ENST00000230538 ADAMTSL1Q8N6G6 1762 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 IL24Q13007 206 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 TCTEX1D1Q8N7M0 179 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 PHYHIPLQ96FC7 376 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 WDR13Q9H1Z4 485 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 SMOC1Q9H4F8 434 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 MANBALQ9NQG1 85 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 TREM2Q9NZC2 230 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 URB1O60287 2271 aaKnown RBP10.21□□□□□ -0.78
LAMA4-201ENST00000230538 CAMPP49913 170 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 ERVS71-1P61550 626 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 UBE2L3P68036 154 aaKnown RBP10.21□□□□□ -0.78
LAMA4-201ENST00000230538 OR8B3Q8NGG8 313 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 OR2I1PQ8NGU4 316 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 OR1L1Q8NH94 360 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 ALG14Q96F25 216 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 OR8B2Q96RD0 313 aa10.21□□□□□ -0.78
LAMA4-201ENST00000230538 CTSDP07339 412 aaPredicted RBP10.2□□□□□ -0.78
LAMA4-201ENST00000230538 RAC3P60763 192 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 POLR2GP62487 172 aaKnown RBP eCLIP10.2□□□□□ -0.78
LAMA4-201ENST00000230538 DHRS11Q6UWP2 260 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 SLC26A10Q8NG04 563 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 LILRB1Q8NHL6 650 aaPredicted RBP10.2□□□□□ -0.78
LAMA4-201ENST00000230538 ANGPTL6Q8NI99 470 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 ATP5SQ99766 215 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 OR2T8A6NH00 312 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 CDX4O14627 284 aaPredicted RBP10.2□□□□□ -0.78
LAMA4-201ENST00000230538 MRPS11P82912 194 aaKnown RBP10.2□□□□□ -0.78
LAMA4-201ENST00000230538 SEZ6L2Q6UXD5 910 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 ZNF547Q8IVP9 402 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 CTGFP29279 349 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 SNRPEP62304 92 aaKnown RBP10.2□□□□□ -0.78
LAMA4-201ENST00000230538 RPS4XP62701 263 aaKnown RBP10.2□□□□□ -0.78
LAMA4-201ENST00000230538 B3GNTL1Q67FW5 361 aaPredicted RBP10.2□□□□□ -0.78
LAMA4-201ENST00000230538 RHBDD2Q6NTF9 364 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 GSX1Q9H4S2 264 aaPredicted RBP10.2□□□□□ -0.78
LAMA4-201ENST00000230538 FAM60AQ9NP50 221 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 PAPPA2Q9BXP8 1791 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 LAMB2P55268 1798 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 HAND1O96004 215 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 HLA-GP17693 338 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 ACP1P24666 158 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 DRD3P35462 400 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 TMEM33P57088 247 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 FOXO1Q12778 655 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 MESTQ5EB52 335 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 COL13A1Q5TAT6 717 aaPredicted RBP10.2□□□□□ -0.78
LAMA4-201ENST00000230538 NUBPLQ8TB37 319 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 OIT3Q8WWZ8 545 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 ZNF426Q9BUY5 554 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 SLC7A10Q9NS82 523 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 DUXBA0A1W2PPF3 345 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 RBFOX3A6NFN3 312 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 TNFSF14O43557 240 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 GABRA1P14867 456 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 CD300CQ08708 224 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 CEBPEQ15744 281 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 C3AR1Q16581 482 aa10.2□□□□□ -0.78
LAMA4-201ENST00000230538 VSTM2AQ8TAG5 236 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms