RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Olfr988Q7TRA1 309 aa13.96□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Q8BTG6 205 aa13.96□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Vmn1r37Q8R2E4 302 aa13.96□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Hoga1Q9DCU9 321 aa13.96□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 C1ql3Q9ESN4 255 aa13.96□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr159Q9QZ19 319 aa13.96□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Nubp2Q9R061 275 aa13.96□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Vmn2r108E9PYS0 855 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Gm10799F7C7U2 104 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Tacr3P47937 452 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Hes3Q61657 175 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Selenbp2Q63836 472 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Snai2P97469 269 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 BC100530Q497J0 97 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Il11ra1Q64385 432 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Galnt14Q8BVG5 550 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Trib3Q8K4K2 354 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Gorasp2Q99JX3 451 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Cx3cr1Q9Z0D9 354 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 ThadaA8C756 1938 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Gm6096D3YTY6 151 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr69E9Q7C5 316 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Susd5G3UW60 619 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Gm20403G3UYB0 123 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Rab1AP62821 205 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Btn1a1Q62556 524 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Poc1bQ8BHD1 476 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Slc24a5Q8C261 501 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 PecrQ99MZ7 303 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Q9CQT9 129 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Bdp1Q571C7 2467 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 RnlsA7RDN6 342 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr173E9QAT7 321 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Ly6aP05533 134 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Rac2Q05144 192 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Dhrs13Q5SS80 376 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Gm21093Q6GQS8 569 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Gpr173Q6PI62 373 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr1014Q7TR95 305 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr1013Q7TR96 305 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr374Q7TRY0 313 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Vash1Q8C1W1 375 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Vmn1r225Q8R2A5 298 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Tmem70Q921N7 253 aa13.95□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr568E9Q554 313 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Gm43191F6YIH5 235 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Bpifa2P07743 235 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Fbxw22Q5XG67 466 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr1212Q7TR08 311 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Fbxo4Q8CHQ0 385 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Commd9Q8K2Q0 198 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Rnf113a1Q8R3P8 341 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Ppp1r14aQ91VC7 147 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Rbmxl1Q91VM5 388 aaKnown RBP13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 PinlypQ9CQD7 212 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Lamp5Q9D387 280 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Mrps34Q9JIK9 218 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Sema7aQ9QUR8 664 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Muc3E9PWP7 378 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 IfnabL7MTU6 190 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Itln1O88310 313 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Taar6Q5QD13 345 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Zfp975Q6NVD6 525 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Tas2r113Q7M711 309 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr1286Q7TQY2 305 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Lrp12Q8BUJ9 858 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr1412Q8VET3 321 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Dazap1Q9JII5 406 aaKnown RBP13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Riox1Q9JJF3 603 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Vstm2bQ9JME9 285 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Ak3Q9WTP7 227 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Gm2663F6R7E8 247 aaKnown RBP13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 9130204L05RikG3UWB8 92 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Gm20696H3BJN7 74 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Cd1d1P11609 336 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Cd1d2P11610 336 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Hspb1P14602 209 aaKnown RBP13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Sema6dQ76KF0 1073 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Tmem255aQ8BHW5 351 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Plppr5Q8BJ52 321 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Actrt3Q8BXF8 369 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Fam234bQ8BYI8 624 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Vmn1r222Q8R269 308 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 1810009J06RikQ9CPN7 247 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Ogfod3Q9D136 315 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Wwtr1Q9EPK5 395 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr267A2AM35 313 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr64F8VPZ8 307 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Lhx8O35652 367 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Tdpoz1P0DMR5 365 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Bcl2P10417 236 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Rab42Q0PD08 215 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Galnt6Q8C7U7 622 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Nsun3Q8CCT7 348 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 P2rx2Q8K3P1 485 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Acer1Q8R4X1 273 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Olfr56Q8VGD6 315 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Pofut1Q91ZW2 393 aa13.94□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 Slc38a6G3UVW3 457 aa13.93□□□□□ -0.18
Ccdc88b-201ENSMUST00000113440 GusbP12265 648 aa13.93□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms