RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 TVP23AA6NH52 213 aa10.86□□□□□ -0.67
SNX1-214ENST00000625244 SERPINE3A8MV23 424 aa10.86□□□□□ -0.67
SNX1-214ENST00000625244 M0QZK8 103 aa10.86□□□□□ -0.67
SNX1-214ENST00000625244 MITFO75030 526 aaPredicted RBP10.86□□□□□ -0.67
SNX1-214ENST00000625244 TK1P04183 234 aa10.86□□□□□ -0.67
SNX1-214ENST00000625244 ALPLP05186 524 aa10.86□□□□□ -0.67
SNX1-214ENST00000625244 SPNP16150 400 aa10.86□□□□□ -0.67
SNX1-214ENST00000625244 ACKR3P25106 362 aa10.86□□□□□ -0.67
SNX1-214ENST00000625244 CX3CR1P49238 355 aa10.86□□□□□ -0.67
SNX1-214ENST00000625244 INSL3P51460 131 aa10.86□□□□□ -0.67
SNX1-214ENST00000625244 CDK5Q00535 292 aa10.86□□□□□ -0.67
SNX1-214ENST00000625244 LYPD4Q6UWN0 246 aa10.86□□□□□ -0.67
SNX1-214ENST00000625244 TCF23Q7RTU1 214 aa10.86□□□□□ -0.67
SNX1-214ENST00000625244 COMMD1Q8N668 190 aa10.86□□□□□ -0.67
SNX1-214ENST00000625244 SLAMF6Q96DU3 332 aa10.86□□□□□ -0.67
SNX1-214ENST00000625244 ZNF488Q96MN9 340 aa10.86□□□□□ -0.67
SNX1-214ENST00000625244 OR51I2Q9H344 312 aa10.86□□□□□ -0.67
SNX1-214ENST00000625244 TVP23BQ9NYZ1 205 aa10.86□□□□□ -0.67
SNX1-214ENST00000625244 DYNC1H1Q14204 4646 aaKnown RBP10.86□□□□□ -0.67
SNX1-214ENST00000625244 RRP9O43818 475 aaKnown RBP10.85□□□□□ -0.67
SNX1-214ENST00000625244 CST4P01036 141 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 GP9P14770 177 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 FMO3P31513 532 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 PYCR1P32322 319 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 SLC35B1P78383 322 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 FHL3Q13643 280 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 TMEM236Q5W0B7 351 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 FAM57BQ71RH2 274 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 PRSS45Q7RTY3 260 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 SATL1Q86VE3 508 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 OR6K6Q8NGW6 343 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 ZNRF4Q8WWF5 429 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 PIGCQ92535 297 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 OR8B4Q96RC9 309 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 GABARAPL3Q9BY60 117 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 IMPAD1Q9NX62 359 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 RASL12Q9NYN1 266 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 H2AFY2Q9P0M6 372 aaPredicted RBP10.85□□□□□ -0.67
SNX1-214ENST00000625244 DPM3Q9P2X0 92 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 MOB4Q9Y3A3 225 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 SESN1Q9Y6P5 492 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 HSPE1-MOB4S4R3N1 261 aa10.85□□□□□ -0.67
SNX1-214ENST00000625244 HERC1Q15751 4861 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 FAM183AA6NL82 134 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 ZAR1LA6NP61 321 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 SLC25A17O43808 307 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 LY6G6CO95867 125 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 CDX1P47902 265 aaPredicted RBP10.84□□□□□ -0.67
SNX1-214ENST00000625244 CDC42P60953 191 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 RPS7P62081 194 aaKnown RBP10.84□□□□□ -0.67
SNX1-214ENST00000625244 EIF2B1Q14232 305 aaKnown RBP10.84□□□□□ -0.67
SNX1-214ENST00000625244 LRRC36Q1X8D7 754 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 LCN1P1Q5VSP4 162 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 SLX4IPQ5VYV7 408 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 TIGD4Q8IY51 512 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 ZDHHC23Q8IYP9 409 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 FTMTQ8N4E7 242 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 PACRGLQ8N7B6 248 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 ZNF676Q8N7Q3 588 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 ZNF555Q8NEP9 628 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 ZNF671Q8TAW3 534 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 AQP3Q92482 292 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 ZNF714Q96N38 554 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 RDH12Q96NR8 316 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 CLEC7AQ9BXN2 247 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 OR51V1Q9H2C8 321 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 TMEM133Q9H2Q1 129 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 ABCB9Q9NP78 766 aa10.84□□□□□ -0.67
SNX1-214ENST00000625244 SIRT4Q9Y6E7 314 aaPredicted RBP10.84□□□□□ -0.67
SNX1-214ENST00000625244 LINC01548A6NM66 108 aa10.83□□□□□ -0.68
SNX1-214ENST00000625244 ZNF732B4DXR9 585 aa10.83□□□□□ -0.68
SNX1-214ENST00000625244 PRODHO43272 600 aa10.83□□□□□ -0.68
SNX1-214ENST00000625244 GYPBP06028 91 aa10.83□□□□□ -0.68
SNX1-214ENST00000625244 IGHV4-30-4P0DP06 118 aa10.83□□□□□ -0.68
SNX1-214ENST00000625244 SNRPBP14678 240 aaKnown RBP10.83□□□□□ -0.68
SNX1-214ENST00000625244 SPI1P17947 270 aa10.83□□□□□ -0.68
SNX1-214ENST00000625244 CFL1P23528 166 aaKnown RBP10.83□□□□□ -0.68
SNX1-214ENST00000625244 SMIM21Q3B7S5 101 aa10.83□□□□□ -0.68
SNX1-214ENST00000625244 ZIK1Q3SY52 487 aaPredicted RBP10.83□□□□□ -0.68
SNX1-214ENST00000625244 TEX38Q6PEX7 206 aa10.83□□□□□ -0.68
SNX1-214ENST00000625244 HAGHLQ6PII5 290 aaPredicted RBP10.83□□□□□ -0.68
SNX1-214ENST00000625244 STPG2Q8N412 459 aa10.83□□□□□ -0.68
SNX1-214ENST00000625244 SPATA25Q9BR10 227 aa10.83□□□□□ -0.68
SNX1-214ENST00000625244 VCX3BQ9H321 246 aa10.83□□□□□ -0.68
SNX1-214ENST00000625244 SMPD3Q9NY59 655 aaPredicted RBP10.83□□□□□ -0.68
SNX1-214ENST00000625244 DNAJC27Q9NZQ0 273 aa10.83□□□□□ -0.68
SNX1-214ENST00000625244 FAT2Q9NYQ8 4349 aa10.83□□□□□ -0.68
SNX1-214ENST00000625244 ZNF878C9JN71 531 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 K7N7A8 449 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 CCRL2O00421 344 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 MMP23AO75900 390 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 SPARCP09486 303 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 EDDM3BP56851 147 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 ZNF121P58317 390 aaPredicted RBP10.82□□□□□ -0.68
SNX1-214ENST00000625244 SNCBQ16143 134 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 SRSF7Q16629 238 aaKnown RBP eCLIP10.82□□□□□ -0.68
SNX1-214ENST00000625244 SLC35D3Q5M8T2 416 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 LPCAT4Q643R3 524 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 C12orf73Q69YU5 71 aa10.82□□□□□ -0.68
SNX1-214ENST00000625244 BAIAP2L2Q6UXY1 529 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms