RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 AZGP1P25311 298 aaKnown RBP15.48■□□□□ 0.07
CCDC28A-203ENST00000617445 MRPL28Q13084 256 aaKnown RBP15.48■□□□□ 0.07
CCDC28A-203ENST00000617445 GALEQ14376 348 aa15.48■□□□□ 0.07
CCDC28A-203ENST00000617445 FAM58AQ8N1B3 248 aa15.48■□□□□ 0.07
CCDC28A-203ENST00000617445 OR11H6Q8NGC7 330 aa15.48■□□□□ 0.07
CCDC28A-203ENST00000617445 OR4C13Q8NGP0 309 aa15.48■□□□□ 0.07
CCDC28A-203ENST00000617445 MALSU1Q96EH3 234 aa15.48■□□□□ 0.07
CCDC28A-203ENST00000617445 ZNF714Q96N38 554 aa15.48■□□□□ 0.07
CCDC28A-203ENST00000617445 INPP5EQ9NRR6 644 aa15.48■□□□□ 0.07
CCDC28A-203ENST00000617445 J3QLW9 94 aa15.47■□□□□ 0.07
CCDC28A-203ENST00000617445 FADS2O95864 444 aaKnown RBP15.47■□□□□ 0.07
CCDC28A-203ENST00000617445 IGHV1-8P0DP01 117 aa15.47■□□□□ 0.07
CCDC28A-203ENST00000617445 ZNF19P17023 458 aa15.47■□□□□ 0.07
CCDC28A-203ENST00000617445 POU3F4P49335 361 aa15.47■□□□□ 0.07
CCDC28A-203ENST00000617445 BMXP51813 675 aa15.47■□□□□ 0.07
CCDC28A-203ENST00000617445 NANOS3P60323 173 aaKnown RBP15.47■□□□□ 0.07
CCDC28A-203ENST00000617445 ZNF91Q05481 1191 aa15.47■□□□□ 0.07
CCDC28A-203ENST00000617445 PDZK1IP1Q13113 114 aa15.47■□□□□ 0.07
CCDC28A-203ENST00000617445 CRIP3Q6Q6R5 217 aa15.47■□□□□ 0.07
CCDC28A-203ENST00000617445 ZNF782Q6ZMW2 699 aaPredicted RBP15.47■□□□□ 0.07
CCDC28A-203ENST00000617445 SYS1Q8N2H4 156 aa15.47■□□□□ 0.07
CCDC28A-203ENST00000617445 HAVCR2Q8TDQ0 301 aa15.47■□□□□ 0.07
CCDC28A-203ENST00000617445 LGALS12Q96DT0 336 aa15.47■□□□□ 0.07
CCDC28A-203ENST00000617445 PELI1Q96FA3 418 aa15.47■□□□□ 0.07
CCDC28A-203ENST00000617445 OPALINQ96PE5 141 aa15.47■□□□□ 0.07
CCDC28A-203ENST00000617445 LINC00312Q9Y6C7 94 aa15.47■□□□□ 0.07
CCDC28A-203ENST00000617445 TMEM82A0PJX8 343 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 OR4C45A6NMZ5 311 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 ODF3BA8MYP8 253 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 MGST3O14880 152 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 INMTO95050 263 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 ALX3O95076 343 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 ARG1P05089 322 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 GABRB1P18505 474 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 ERP29P30040 261 aaKnown RBP15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 NPBWR2P48146 333 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 ALKBH1Q13686 389 aaKnown RBP15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 GRK1Q15835 563 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 LY6EQ16553 131 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 ZNF626Q68DY1 528 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 SAXO1Q8IYX7 474 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 ZNF676Q8N7Q3 588 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 OR13C3Q8NGS6 347 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 OR2T6Q8NHC8 308 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 RHOXF1Q8NHV9 184 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 C4orf36Q96KX1 117 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 NPFFR1Q9GZQ6 430 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 RBFOX1Q9NWB1 397 aaKnown RBP15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 PCDHGB5Q9Y5G0 923 aa15.46■□□□□ 0.07
CCDC28A-203ENST00000617445 KIAA2026Q5HYC2 2103 aa15.46■□□□□ 0.06
CCDC28A-203ENST00000617445 FUOMA2VDF0 154 aa15.45■□□□□ 0.06
CCDC28A-203ENST00000617445 SH2D1BO14796 132 aa15.45■□□□□ 0.06
CCDC28A-203ENST00000617445 DBTP11182 482 aaKnown RBP15.45■□□□□ 0.06
CCDC28A-203ENST00000617445 PRKACAP17612 351 aa15.45■□□□□ 0.06
CCDC28A-203ENST00000617445 BCL3P20749 454 aa15.45■□□□□ 0.06
CCDC28A-203ENST00000617445 GABRR1P24046 479 aa15.45■□□□□ 0.06
CCDC28A-203ENST00000617445 RAB40BQ12829 278 aa15.45■□□□□ 0.06
CCDC28A-203ENST00000617445 C2orf68Q2NKX9 166 aa15.45■□□□□ 0.06
CCDC28A-203ENST00000617445 ZBTB49Q6ZSB9 765 aa15.45■□□□□ 0.06
CCDC28A-203ENST00000617445 PIFOQ8TCI5 191 aa15.45■□□□□ 0.06
CCDC28A-203ENST00000617445 ALG8Q9BVK2 526 aa15.45■□□□□ 0.06
CCDC28A-203ENST00000617445 HMG20AQ9NP66 347 aa15.45■□□□□ 0.06
CCDC28A-203ENST00000617445 PITPNC1Q9UKF7 332 aa15.45■□□□□ 0.06
CCDC28A-203ENST00000617445 TET2Q6N021 2002 aaPredicted RBP15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 TMEM212A6NML5 194 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 IGHA1P01876 353 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 DYNLT3P51808 116 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 EFNB2P52799 333 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 DEFA6Q01524 100 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 EDDM3AQ14507 147 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 HERPUD1Q15011 391 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 MINOS1Q5TGZ0 78 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 Q6ZTK2 550 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 LHFPL4Q7Z7J7 247 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 LHFPL3Q86UP9 236 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 SERPINA12Q8IW75 414 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 OR52N4Q8NGI2 321 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 OR5D14Q8NGL3 314 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 RPS4Y2Q8TD47 263 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 ZCCHC4Q9H5U6 513 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 S100A14Q9HCY8 104 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 ABCB10Q9NRK6 738 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 MRPS18AQ9NVS2 196 aaKnown RBP15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 UBE2J1Q9Y385 318 aaPredicted RBP15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 RPL36Q9Y3U8 105 aaKnown RBP15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 SESN1Q9Y6P5 492 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 MINOS1-NBL1R4GNA1 71 aa15.44■□□□□ 0.06
CCDC28A-203ENST00000617445 LOC100130705A0A1B0GUX0 176 aa15.43■□□□□ 0.06
CCDC28A-203ENST00000617445 H3BUI4 141 aa15.43■□□□□ 0.06
CCDC28A-203ENST00000617445 KCNAB3O43448 404 aa15.43■□□□□ 0.06
CCDC28A-203ENST00000617445 PSPNO60542 156 aa15.43■□□□□ 0.06
CCDC28A-203ENST00000617445 KDM4BO94953 1096 aa15.43■□□□□ 0.06
CCDC28A-203ENST00000617445 CCDC159P0C7I6 412 aa15.43■□□□□ 0.06
CCDC28A-203ENST00000617445 LMO1P25800 156 aa15.43■□□□□ 0.06
CCDC28A-203ENST00000617445 KLHL22Q53GT1 634 aa15.43■□□□□ 0.06
CCDC28A-203ENST00000617445 PQLC1Q8N2U9 271 aa15.43■□□□□ 0.06
CCDC28A-203ENST00000617445 OR51A4Q8NGJ6 313 aa15.43■□□□□ 0.06
CCDC28A-203ENST00000617445 COMMD4Q9H0A8 199 aa15.43■□□□□ 0.06
CCDC28A-203ENST00000617445 EXOSC4Q9NPD3 245 aaKnown RBP15.43■□□□□ 0.06
CCDC28A-203ENST00000617445 ERVK13-1Q9NX77 482 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms