RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 PAK1IP1Q9NWT1 392 aaPredicted RBP13.75□□□□□ -0.21
SSBP4-213ENST00000602088 TAS2R4Q9NYW5 299 aa13.75□□□□□ -0.21
SSBP4-213ENST00000602088 ERGIC3Q9Y282 383 aa13.75□□□□□ -0.21
SSBP4-213ENST00000602088 IGHV1-69DA0A0B4J2H0 117 aa13.74□□□□□ -0.21
SSBP4-213ENST00000602088 TRIM77I1YAP6 450 aa13.74□□□□□ -0.21
SSBP4-213ENST00000602088 M0R1W7 72 aa13.74□□□□□ -0.21
SSBP4-213ENST00000602088 KDM4BO94953 1096 aa13.74□□□□□ -0.21
SSBP4-213ENST00000602088 IGHV1-69P01742 117 aa13.74□□□□□ -0.21
SSBP4-213ENST00000602088 CD1AP06126 327 aa13.74□□□□□ -0.21
SSBP4-213ENST00000602088 CALCBP10092 127 aa13.74□□□□□ -0.21
SSBP4-213ENST00000602088 PRKACAP17612 351 aa13.74□□□□□ -0.21
SSBP4-213ENST00000602088 CELP19835 753 aa13.74□□□□□ -0.21
SSBP4-213ENST00000602088 ZP1P60852 638 aa13.74□□□□□ -0.21
SSBP4-213ENST00000602088 RPL31P62899 125 aaKnown RBP13.74□□□□□ -0.21
SSBP4-213ENST00000602088 SLC35A2P78381 396 aa13.74□□□□□ -0.21
SSBP4-213ENST00000602088 Q499Y3 187 aa13.74□□□□□ -0.21
SSBP4-213ENST00000602088 YIF1BQ5BJH7 314 aa13.74□□□□□ -0.21
SSBP4-213ENST00000602088 RUSC1-AS1Q66K80 236 aa13.74□□□□□ -0.21
SSBP4-213ENST00000602088 METAP1DQ6UB28 335 aaPredicted RBP13.74□□□□□ -0.21
SSBP4-213ENST00000602088 FIP1L1Q6UN15 594 aaKnown RBP13.74□□□□□ -0.21
SSBP4-213ENST00000602088 ASCC1Q8N9N2 400 aaKnown RBP13.74□□□□□ -0.21
SSBP4-213ENST00000602088 ZSCAN4Q8NAM6 433 aaPredicted RBP13.74□□□□□ -0.21
SSBP4-213ENST00000602088 SGCDQ92629 289 aa13.74□□□□□ -0.21
SSBP4-213ENST00000602088 PRDM13Q9H4Q3 707 aa13.74□□□□□ -0.21
SSBP4-213ENST00000602088 METTL8Q9H825 291 aaKnown RBP13.74□□□□□ -0.21
SSBP4-213ENST00000602088 UNKLQ9H9P5 680 aaKnown RBP13.74□□□□□ -0.21
SSBP4-213ENST00000602088 SIRT7Q9NRC8 400 aa13.74□□□□□ -0.21
SSBP4-213ENST00000602088 PCDHGB5Q9Y5G0 923 aa13.74□□□□□ -0.21
SSBP4-213ENST00000602088 MAGEB3O15480 346 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 HAND1O96004 215 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 ALDOBP05062 364 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 TMEM225BP0DP42 221 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 DUSP1P28562 367 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 BDH1Q02338 343 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 ACSM1Q08AH1 577 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 DEFB112Q30KQ8 113 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 SPIN3Q5JUX0 258 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 TMEM200BQ69YZ2 307 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 C17orf107Q6ZR85 190 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 FAM185AQ8N0U4 392 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.73□□□□□ -0.21
SSBP4-213ENST00000602088 OR4M1Q8NGD0 313 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 OR52N4Q8NGI2 321 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 TBC1D15Q8TC07 691 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 FAM216AQ8WUB2 273 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 TNFRSF14Q92956 283 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 ORAI1Q96D31 301 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 CPNE2Q96FN4 548 aaPredicted RBP13.73□□□□□ -0.21
SSBP4-213ENST00000602088 SNX22Q96L94 193 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 MND1Q9BWT6 205 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 DUSP21Q9H596 190 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 TPRKBQ9Y3C4 175 aa13.73□□□□□ -0.21
SSBP4-213ENST00000602088 TENM1Q9UKZ4 2725 aa13.72□□□□□ -0.21
SSBP4-213ENST00000602088 PNMA8CA0A1B0GUJ8 204 aa13.72□□□□□ -0.21
SSBP4-213ENST00000602088 TMEM82A0PJX8 343 aa13.72□□□□□ -0.21
SSBP4-213ENST00000602088 RNASEK-C17orf49H0YIS7 233 aa13.72□□□□□ -0.21
SSBP4-213ENST00000602088 GPX5O75715 221 aa13.72□□□□□ -0.21
SSBP4-213ENST00000602088 PRTN3P24158 256 aa13.72□□□□□ -0.21
SSBP4-213ENST00000602088 UBA52P62987 128 aaKnown RBP13.72□□□□□ -0.21
SSBP4-213ENST00000602088 BAMBIQ13145 260 aa13.72□□□□□ -0.21
SSBP4-213ENST00000602088 BLMHQ13867 455 aa13.72□□□□□ -0.21
SSBP4-213ENST00000602088 SATL1Q86VE3 508 aa13.72□□□□□ -0.21
SSBP4-213ENST00000602088 PDZD9Q8IXQ8 264 aa13.72□□□□□ -0.21
SSBP4-213ENST00000602088 OR8H2Q8N162 312 aa13.72□□□□□ -0.21
SSBP4-213ENST00000602088 OR5D13Q8NGL4 314 aa13.72□□□□□ -0.21
SSBP4-213ENST00000602088 C1orf147Q96MC9 270 aaPredicted RBP13.72□□□□□ -0.21
SSBP4-213ENST00000602088 TMEM138Q9NPI0 162 aa13.72□□□□□ -0.21
SSBP4-213ENST00000602088 GLS2Q9UI32 602 aa13.72□□□□□ -0.21
SSBP4-213ENST00000602088 RAB26Q9ULW5 256 aa13.72□□□□□ -0.21
SSBP4-213ENST00000602088 GSTK1Q9Y2Q3 226 aa13.72□□□□□ -0.21
SSBP4-213ENST00000602088 LSM2Q9Y333 95 aaKnown RBP13.72□□□□□ -0.21
SSBP4-213ENST00000602088 TRBV5-7A0A0A0MS05 114 aa13.71□□□□□ -0.21
SSBP4-213ENST00000602088 MDFIC2A0A1B0GVS7 189 aa13.71□□□□□ -0.21
SSBP4-213ENST00000602088 DNAJC9-AS1A6NH13 148 aa13.71□□□□□ -0.21
SSBP4-213ENST00000602088 GABRPO00591 440 aa13.71□□□□□ -0.21
SSBP4-213ENST00000602088 SH2D1BO14796 132 aa13.71□□□□□ -0.21
SSBP4-213ENST00000602088 IGFBP3P17936 291 aaPredicted RBP13.71□□□□□ -0.21
SSBP4-213ENST00000602088 VHLP40337 213 aa13.71□□□□□ -0.21
SSBP4-213ENST00000602088 SNU13P55769 128 aaKnown RBP13.71□□□□□ -0.21
SSBP4-213ENST00000602088 DLX1P56177 255 aa13.71□□□□□ -0.21
SSBP4-213ENST00000602088 PPP3R1P63098 170 aa13.71□□□□□ -0.21
SSBP4-213ENST00000602088 IRF3Q14653 427 aa13.71□□□□□ -0.21
SSBP4-213ENST00000602088 ASCL4Q6XD76 172 aa13.71□□□□□ -0.21
SSBP4-213ENST00000602088 GDPD3Q7L5L3 318 aa13.71□□□□□ -0.21
SSBP4-213ENST00000602088 PIP4P2Q8N4L2 257 aa13.71□□□□□ -0.21
SSBP4-213ENST00000602088 C11orf42Q8N5U0 333 aa13.71□□□□□ -0.21
SSBP4-213ENST00000602088 PXT1Q8NFP0 134 aa13.71□□□□□ -0.21
SSBP4-213ENST00000602088 OR14A2Q96R54 314 aa13.71□□□□□ -0.21
SSBP4-213ENST00000602088 GPER1Q99527 375 aa13.71□□□□□ -0.21
SSBP4-213ENST00000602088 A0A1W2PPH5 198 aa13.7□□□□□ -0.22
SSBP4-213ENST00000602088 PSPNO60542 156 aa13.7□□□□□ -0.22
SSBP4-213ENST00000602088 GABRR1P24046 479 aa13.7□□□□□ -0.22
SSBP4-213ENST00000602088 CRHBPP24387 322 aa13.7□□□□□ -0.22
SSBP4-213ENST00000602088 LMO1P25800 156 aa13.7□□□□□ -0.22
SSBP4-213ENST00000602088 BDKRB2P30411 391 aa13.7□□□□□ -0.22
SSBP4-213ENST00000602088 PTGFRP43088 359 aa13.7□□□□□ -0.22
SSBP4-213ENST00000602088 GUCA2AQ02747 115 aa13.7□□□□□ -0.22
SSBP4-213ENST00000602088 PRB3Q04118 309 aaPredicted RBP13.7□□□□□ -0.22
SSBP4-213ENST00000602088 SPHARQ15513 63 aa13.7□□□□□ -0.22
SSBP4-213ENST00000602088 ELP2Q6IA86 826 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms