RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 NPBWR2P48146 333 aa10.28□□□□□ -0.76
TGFB1-204ENST00000600196 ART1P52961 327 aa10.28□□□□□ -0.76
TGFB1-204ENST00000600196 RBM11P57052 281 aaKnown RBP10.28□□□□□ -0.76
TGFB1-204ENST00000600196 LSM3P62310 102 aaKnown RBP10.28□□□□□ -0.76
TGFB1-204ENST00000600196 RPS27AP62979 156 aaKnown RBP10.28□□□□□ -0.76
TGFB1-204ENST00000600196 ZMYND11Q15326 602 aa10.28□□□□□ -0.76
TGFB1-204ENST00000600196 SLC22A6Q4U2R8 563 aa10.28□□□□□ -0.76
TGFB1-204ENST00000600196 DMRTC1Q5HYR2 192 aa10.28□□□□□ -0.76
TGFB1-204ENST00000600196 SPNS3Q6ZMD2 512 aa10.28□□□□□ -0.76
TGFB1-204ENST00000600196 LINC00299Q6ZSB3 139 aa10.28□□□□□ -0.76
TGFB1-204ENST00000600196 OR5D18Q8NGL1 313 aa10.28□□□□□ -0.76
TGFB1-204ENST00000600196 DYNC2LI1Q8TCX1 351 aa10.28□□□□□ -0.76
TGFB1-204ENST00000600196 RAB40AQ8WXH6 277 aa10.28□□□□□ -0.76
TGFB1-204ENST00000600196 RFT1Q96AA3 541 aa10.28□□□□□ -0.76
TGFB1-204ENST00000600196 SNX22Q96L94 193 aa10.28□□□□□ -0.76
TGFB1-204ENST00000600196 TMEM246Q9BRR3 403 aa10.28□□□□□ -0.76
TGFB1-204ENST00000600196 TMEM59Q9BXS4 323 aa10.28□□□□□ -0.76
TGFB1-204ENST00000600196 BPESC1Q9GZL8 116 aa10.28□□□□□ -0.76
TGFB1-204ENST00000600196 ELL3Q9HB65 397 aaPredicted RBP10.28□□□□□ -0.76
TGFB1-204ENST00000600196 TREM2Q9NZC2 230 aa10.28□□□□□ -0.76
TGFB1-204ENST00000600196 ZNF222Q9UK12 451 aa10.28□□□□□ -0.76
TGFB1-204ENST00000600196 ST3GAL6Q9Y274 331 aa10.28□□□□□ -0.76
TGFB1-204ENST00000600196 POLQO75417 2590 aa10.27□□□□□ -0.76
TGFB1-204ENST00000600196 PPIAL4CA0A0B4J2A2 164 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 FUOMA2VDF0 154 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 CCDC160A6NGH7 325 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 F5H0A9 414 aaPredicted RBP10.27□□□□□ -0.77
TGFB1-204ENST00000600196 LYNX1G3V0Z9 82 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 LY6HO94772 140 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 CSN2P05814 226 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 LYNX1P0DP58 116 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 MGMTP16455 207 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 PRKACAP17612 351 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 EGR1P18146 543 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 CAV3P56539 151 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 OR10A3P58181 314 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 IL13RA1P78552 427 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 MXD1Q05195 221 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 RBM39Q14498 530 aaKnown RBP10.27□□□□□ -0.77
TGFB1-204ENST00000600196 CD276Q5ZPR3 534 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 RNF144BQ7Z419 303 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 KRTAP1-3Q8IUG1 177 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 OR51D1Q8NGF3 324 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 OR56B1Q8NGI3 324 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 NEIL1Q96FI4 390 aaPredicted RBP10.27□□□□□ -0.77
TGFB1-204ENST00000600196 Q96M66 194 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 GAL3ST1Q99999 423 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 WDR13Q9H1Z4 485 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 ABCG5Q9H222 651 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 RNF167Q9H6Y7 350 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 RBFOX1Q9NWB1 397 aaKnown RBP10.27□□□□□ -0.77
TGFB1-204ENST00000600196 DAPK2Q9UIK4 370 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 HSF4Q9ULV5 492 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 PCDHB10Q9UN67 800 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 PDZD2O15018 2839 aa10.27□□□□□ -0.77
TGFB1-204ENST00000600196 IGKV1D-17A0A075B6S4 117 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 RFPL4AA6NLU0 287 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 A8MXK9 166 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 RFPL4AL1F8VTS6 287 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 H7C1Q1 480 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 DEGS1O15121 323 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 CRTAPO75718 401 aaPredicted RBP10.26□□□□□ -0.77
TGFB1-204ENST00000600196 HAND1O96004 215 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 PLATP00750 562 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 FUT3P21217 361 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 ERP29P30040 261 aaKnown RBP10.26□□□□□ -0.77
TGFB1-204ENST00000600196 HNRNPA0Q13151 305 aaKnown RBP10.26□□□□□ -0.77
TGFB1-204ENST00000600196 SPCS2Q15005 226 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 CARTPTQ16568 116 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 LRRC10Q5BKY1 277 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 IDNKQ5T6J7 187 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 HES5Q5TA89 166 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 TGIF2LYQ8IUE0 185 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 OR8B3Q8NGG8 313 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 OR8B2Q96RD0 313 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 REG4Q9BYZ8 158 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 NXF2Q9GZY0 626 aaKnown RBP10.26□□□□□ -0.77
TGFB1-204ENST00000600196 MMP27Q9H306 513 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 RIMS4Q9H426 269 aaPredicted RBP10.26□□□□□ -0.77
TGFB1-204ENST00000600196 RCC2Q9P258 522 aaKnown RBP10.26□□□□□ -0.77
TGFB1-204ENST00000600196 LPAR3Q9UBY5 353 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 OR5V1Q9UGF6 321 aa10.26□□□□□ -0.77
TGFB1-204ENST00000600196 PRRC2AP48634 2157 aaKnown RBP10.26□□□□□ -0.77
TGFB1-204ENST00000600196 IGHV4-30-2A0A087WSY4 118 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 A0A096LNT2 108 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 IGHV3-64DA0A0J9YX35 117 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 TMEM272A0A1B0GTI8 110 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 CEACAM18A8MTB9 384 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 C3orf80F5H4A9 247 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 F8VVB4 439 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 F8VWA3 439 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 K7N7A8 449 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 MGST3O14880 152 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 NDUFB3O43676 98 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 FOXH1O75593 365 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 IGHV2-5P01817 119 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 APOA1P02647 267 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 LIPFP07098 398 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 CLEC2LP0C7M8 214 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 FOSL1P15407 271 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 181.7 ms