RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 C8orf46Q8TAG6 207 aa14.37□□□□□ -0.11
SHKBP1-203ENST00000594298 GPR148Q8TDV2 347 aa14.37□□□□□ -0.11
SHKBP1-203ENST00000594298 SEH1LQ96EE3 360 aa14.37□□□□□ -0.11
SHKBP1-203ENST00000594298 ANKRD60Q9BZ19 345 aa14.37□□□□□ -0.11
SHKBP1-203ENST00000594298 ZCCHC4Q9H5U6 513 aa14.37□□□□□ -0.11
SHKBP1-203ENST00000594298 ONECUT1Q9UBC0 465 aa14.37□□□□□ -0.11
SHKBP1-203ENST00000594298 TPRKBQ9Y3C4 175 aa14.37□□□□□ -0.11
SHKBP1-203ENST00000594298 BTBD17A6NE02 478 aa14.36□□□□□ -0.11
SHKBP1-203ENST00000594298 OGG1O15527 345 aa14.36□□□□□ -0.11
SHKBP1-203ENST00000594298 SYNGR1O43759 233 aa14.36□□□□□ -0.11
SHKBP1-203ENST00000594298 ALX3O95076 343 aa14.36□□□□□ -0.11
SHKBP1-203ENST00000594298 MT-ND2P03891 347 aa14.36□□□□□ -0.11
SHKBP1-203ENST00000594298 AMY2BP19961 511 aa14.36□□□□□ -0.11
SHKBP1-203ENST00000594298 AZGP1P25311 298 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-203ENST00000594298 TGFBR2P37173 567 aa14.36□□□□□ -0.11
SHKBP1-203ENST00000594298 VHLP40337 213 aa14.36□□□□□ -0.11
SHKBP1-203ENST00000594298 ACP7Q6ZNF0 438 aa14.36□□□□□ -0.11
SHKBP1-203ENST00000594298 ZNF788Q6ZQV5 615 aa14.36□□□□□ -0.11
SHKBP1-203ENST00000594298 CALHM1Q8IU99 346 aa14.36□□□□□ -0.11
SHKBP1-203ENST00000594298 NRIP2Q9BQI9 281 aa14.36□□□□□ -0.11
SHKBP1-203ENST00000594298 DCTN5Q9BTE1 182 aa14.36□□□□□ -0.11
SHKBP1-203ENST00000594298 FKBP14Q9NWM8 211 aa14.36□□□□□ -0.11
SHKBP1-203ENST00000594298 ZNF281Q9Y2X9 895 aa14.36□□□□□ -0.11
SHKBP1-203ENST00000594298 PTGES3LE9PB15 166 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 RNASEK-C17orf49H0YIS7 233 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 NPFFO15130 113 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 CDK1P06493 297 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 PSG2P11465 335 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 EEF1B2P24534 225 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 C2orf68Q2NKX9 166 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 RNLSQ5VYX0 342 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 C1orf122Q6ZSJ8 110 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 Q8IYB0 196 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 PARP16Q8N5Y8 322 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 Q8N7P7 452 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 OR13C9Q8NGT0 318 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 RPS4Y2Q8TD47 263 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 TNFRSF14Q92956 283 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 SMIM19Q96E16 107 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 CPNE2Q96FN4 548 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 OPALINQ96PE5 141 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 SIRT7Q9NRC8 400 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 RAB26Q9ULW5 256 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 PCDHGB5Q9Y5G0 923 aa14.35□□□□□ -0.11
SHKBP1-203ENST00000594298 IGKV1-9A0A0C4DH69 117 aa14.34□□□□□ -0.11
SHKBP1-203ENST00000594298 SLC1A7O00341 560 aa14.34□□□□□ -0.11
SHKBP1-203ENST00000594298 SIGLEC5O15389 551 aa14.34□□□□□ -0.11
SHKBP1-203ENST00000594298 MAGEB3O15480 346 aa14.34□□□□□ -0.11
SHKBP1-203ENST00000594298 C21orf33P30042 268 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-203ENST00000594298 WNT4P56705 351 aa14.34□□□□□ -0.11
SHKBP1-203ENST00000594298 IKZF1Q13422 519 aa14.34□□□□□ -0.11
SHKBP1-203ENST00000594298 SLC25A26Q70HW3 274 aa14.34□□□□□ -0.11
SHKBP1-203ENST00000594298 NANOGP1Q8N7R0 232 aa14.34□□□□□ -0.11
SHKBP1-203ENST00000594298 OR5R1Q8NH85 324 aa14.34□□□□□ -0.11
SHKBP1-203ENST00000594298 SDSLQ96GA7 329 aa14.34□□□□□ -0.11
SHKBP1-203ENST00000594298 CEP19Q96LK0 163 aa14.34□□□□□ -0.11
SHKBP1-203ENST00000594298 ZNF488Q96MN9 340 aa14.34□□□□□ -0.11
SHKBP1-203ENST00000594298 GAFA1Q96PS6 74 aa14.34□□□□□ -0.11
SHKBP1-203ENST00000594298 MND1Q9BWT6 205 aa14.34□□□□□ -0.11
SHKBP1-203ENST00000594298 SLC25A10Q9UBX3 287 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-203ENST00000594298 IGKV1D-17A0A075B6S4 117 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 IGKV1-27A0A075B6S5 117 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 RFPL4AA6NLU0 287 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 RFPL4AL1F8VTS6 287 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 SULT1B1O43704 296 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 RAB3AP20336 220 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 PRDX2P32119 198 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 CAV3P56539 151 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 ERVK11-1P61568 191 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 ACSM1Q08AH1 577 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 YIF1BQ5BJH7 314 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 DMKNQ6E0U4 476 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 XAF1Q6GPH4 301 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 ZNF561Q8N587 486 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 ZNF485Q8NCK3 441 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 GHSRQ92847 366 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 CDCA4Q9BXL8 241 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 HES4Q9HCC6 221 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 FBLN5Q9UBX5 448 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 WNK1Q9H4A3 2382 aa14.33□□□□□ -0.12
SHKBP1-203ENST00000594298 NOTCH1P46531 2555 aa14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 M0R1W7 72 aa14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 CD1AP06126 327 aa14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 HCKP08631 526 aa14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 NDUFB7P17568 137 aa14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 SAA4P35542 130 aa14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 SOX2P48431 317 aa14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 POU3F4P49335 361 aa14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 UBE2E1P51965 193 aa14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 CAPZA1P52907 286 aa14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 BDH1Q02338 343 aa14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 PDZK1IP1Q13113 114 aa14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 NCR3LG1Q68D85 454 aa14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 FAM110DQ8TAY7 271 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 SLAMF9Q96A28 289 aa14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 Q9H521 79 aa14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 METTL8Q9H825 291 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 RHOFQ9HBH0 211 aa14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 MTCH1Q9NZJ7 389 aa14.32□□□□□ -0.12
SHKBP1-203ENST00000594298 GLS2Q9UI32 602 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms