RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 GLS2Q9UI32 602 aa12.9□□□□□ -0.34
RPRD1A-208ENST00000589050 NOTCH2Q04721 2471 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 A0A1B0GW55 424 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 SH2D1BO14796 132 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 HAND1O96004 215 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 IL1AP01583 271 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 DUX4L2P0CJ85 424 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 DUX4L3P0CJ86 424 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 DUX4L4P0CJ87 422 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 DUX4L5P0CJ88 424 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 DUX4L6P0CJ89 424 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 DUX4L7P0CJ90 424 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 VSIG8P0DPA2 414 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 SLC2A2P11168 524 aaPredicted RBP12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 CPT2P23786 658 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 CFPP27918 469 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 RPS19P39019 145 aaKnown RBP12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 PITPNBP48739 271 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 CAPZA1P52907 286 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 SEC61A1P61619 476 aaKnown RBP12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 IL13RA1P78552 427 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 IKZF1Q13422 519 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 BLMHQ13867 455 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 ZNF146Q15072 292 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 PIGYQ3MUY2 71 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 OR10K2Q6IF99 312 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 SFXN4Q6P4A7 337 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 DUX4L9Q6RFH8 374 aaPredicted RBP12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 ZNF788Q6ZQV5 615 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 TMEM104Q8NE00 496 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 OR51D1Q8NGF3 324 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 OR51T1Q8NGJ9 327 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 FAM3DQ96BQ1 224 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 SDSLQ96GA7 329 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 MED30Q96HR3 178 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 BANF2Q9H503 90 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 KAAG1Q9UBP8 84 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 DUX4Q9UBX2 424 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 DAPK2Q9UIK4 370 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 ST3GAL6Q9Y274 331 aa12.89□□□□□ -0.35
RPRD1A-208ENST00000589050 PRRC2AP48634 2157 aaKnown RBP12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 ARID1AO14497 2285 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 OTOGQ6ZRI0 2925 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 A0A0B4J203 849 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 SIGLEC5O15389 551 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 MPIG6BO95866 241 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 CHRM2P08172 466 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 SELLP14151 372 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 MGMTP16455 207 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 RBM11P57052 281 aaKnown RBP12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 COL10A1Q03692 680 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 SCN1BQ07699 218 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 IL13RA2Q14627 380 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 PDCD1Q15116 288 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 TMEM249Q2WGJ8 235 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 ESCO2Q56NI9 601 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 USP43Q70EL4 1123 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 ZNRF1Q8ND25 227 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 KCNG3Q8TAE7 436 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 NDNFQ8TB73 568 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 MRPS24Q96EL2 167 aaKnown RBP12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 COX4I2Q96KJ9 171 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 BCL7BQ9BQE9 202 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 SELENOIQ9C0D9 397 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 LIN7BQ9HAP6 207 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 MAB21L2Q9Y586 359 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 CEPT1Q9Y6K0 416 aa12.88□□□□□ -0.35
RPRD1A-208ENST00000589050 CCDC160A6NGH7 325 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 TMEM14DPA8MWL7 114 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 FAM157AC9JC47 383 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 SIRPB1O00241 398 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 DVL1O14640 695 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 DEGS1O15121 323 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 NDUFB3O43676 98 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 OR2H2O95918 312 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 ZNF44P15621 663 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 GNB2P62879 340 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 QRFPP83859 136 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 UNC119Q13432 240 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 C2orf76Q3KRA6 126 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 LRRC10Q5BKY1 277 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 NHLRC3Q5JS37 347 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 IDNKQ5T6J7 187 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 ZNF841Q6ZN19 808 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 OR2W3Q7Z3T1 314 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 CROCCP3Q8IVE0 287 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 ZNF561Q8N587 486 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 ASCC1Q8N9N2 400 aaKnown RBP12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 TMEM185AQ8NFB2 350 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 ISOC1Q96CN7 298 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 C18orf12Q96KH6 178 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 SSBP3Q9BWW4 388 aaPredicted RBP12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 DCSTAMPQ9H295 470 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 SEBOXQ9HB31 216 aaPredicted RBP12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 CLN8Q9UBY8 286 aa12.87□□□□□ -0.35
RPRD1A-208ENST00000589050 TMEM272A0A1B0GTI8 110 aa12.86□□□□□ -0.35
RPRD1A-208ENST00000589050 GEMIN2O14893 280 aaKnown RBP12.86□□□□□ -0.35
RPRD1A-208ENST00000589050 PHF1O43189 567 aaPredicted RBP12.86□□□□□ -0.35
RPRD1A-208ENST00000589050 IGHV4-31P0DP07 118 aa12.86□□□□□ -0.35
RPRD1A-208ENST00000589050 CD99P14209 185 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms