RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 TRAV8-7A0A075B6U6 113 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 PPIAL4CA0A0B4J2A2 164 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 LINC00854A0A1B0GVQ3 168 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 TRDV1A0A1B0GX56 115 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 GABRPO00591 440 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 AKR7A2O43488 359 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 SYNGR1O43759 233 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 B3GALNT1O75752 331 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 KDM4BO94953 1096 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 S100A6P06703 90 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 WNT2P09544 360 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 CD37P11049 281 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 JUNBP17275 347 aaPredicted RBP8.24□□□□□ -1.09
GGA3-209ENST00000580646 SRMP19623 302 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 PSMB9P28065 219 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 FGF9P31371 208 aaPredicted RBP8.24□□□□□ -1.09
GGA3-209ENST00000580646 CD80P33681 288 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 ZNF93P35789 620 aaPredicted RBP8.24□□□□□ -1.09
GGA3-209ENST00000580646 BMXP51813 675 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 P2RX3P56373 397 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 RPS25P62851 125 aaKnown RBP8.24□□□□□ -1.09
GGA3-209ENST00000580646 HSD17B12Q53GQ0 312 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 DDI2Q5TDH0 399 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 STUMQ69YW2 141 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 FAHD2BQ6P2I3 314 aaPredicted RBP8.24□□□□□ -1.09
GGA3-209ENST00000580646 ASCL4Q6XD76 172 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 ACP7Q6ZNF0 438 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 SLC25A26Q70HW3 274 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 NLRC3Q7RTR2 1065 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 CEACAM19Q7Z692 300 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 ANGPTL5Q86XS5 388 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 LYPD6Q86Y78 171 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 CADM3Q8N126 398 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 PNLDC1Q8NA58 520 aaKnown RBP8.24□□□□□ -1.09
GGA3-209ENST00000580646 Q8NFD4 153 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 OR52N4Q8NGI2 321 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 OR51A2Q8NGJ7 313 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 TBC1D15Q8TC07 691 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 TMIGD2Q96BF3 282 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 ISOC1Q96CN7 298 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 FOXRED1Q96CU9 486 aaPredicted RBP8.24□□□□□ -1.09
GGA3-209ENST00000580646 NEIL1Q96FI4 390 aaPredicted RBP8.24□□□□□ -1.09
GGA3-209ENST00000580646 FAHD2AQ96GK7 314 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 METTL17Q9H7H0 456 aaPredicted RBP8.24□□□□□ -1.09
GGA3-209ENST00000580646 TCF7L1Q9HCS4 588 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 MTCH1Q9NZJ7 389 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 NLKQ9UBE8 527 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 DNAJB11Q9UBS4 358 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 NUP50Q9UKX7 468 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 PCDHB10Q9UN67 800 aa8.24□□□□□ -1.09
GGA3-209ENST00000580646 OR2AT4A6NND4 320 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 C3orf80F5H4A9 247 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 TRAPPC2LH3BP13 241 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 BET1O15155 118 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 GPR37O15354 613 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 ZNF780AO75290 641 aaPredicted RBP8.23□□□□□ -1.09
GGA3-209ENST00000580646 INMTO95050 263 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 NXPH2O95156 264 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 KNG1P01042 644 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 RPS2P15880 293 aaKnown RBP8.23□□□□□ -1.09
GGA3-209ENST00000580646 GP2P55259 537 aaKnown RBP8.23□□□□□ -1.09
GGA3-209ENST00000580646 S100A12P80511 92 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 SRSF2Q01130 221 aaKnown RBP8.23□□□□□ -1.09
GGA3-209ENST00000580646 FABP5Q01469 135 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 HNRNPA0Q13151 305 aaKnown RBP8.23□□□□□ -1.09
GGA3-209ENST00000580646 NEDD8Q15843 81 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 KRTAP24-1Q3LI83 254 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 FAM201AQ5SY85 155 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 SFRP4Q6FHJ7 346 aaPredicted RBP8.23□□□□□ -1.09
GGA3-209ENST00000580646 ELP2Q6IA86 826 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 FIP1L1Q6UN15 594 aaKnown RBP8.23□□□□□ -1.09
GGA3-209ENST00000580646 ZNF788Q6ZQV5 615 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 USP43Q70EL4 1123 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 SLC36A1Q7Z2H8 476 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 OR8B3Q8NGG8 313 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 TMEM203Q969S6 136 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 SDSLQ96GA7 329 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 DMRTB1Q96MA1 342 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 OR8B2Q96RD0 313 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 SLITRK2Q9H156 845 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 WDR13Q9H1Z4 485 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 SMURF1Q9HCE7 757 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 IL36GQ9NZH8 169 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 METRNQ9UJH8 293 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 ZNF222Q9UK12 451 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 ARHGAP32A7KAX9 2087 aa8.23□□□□□ -1.09
GGA3-209ENST00000580646 TRAV1-2A0A0B4J238 106 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 IGKV1-12A0A0C4DH73 117 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 A0A1W2PPK0 400 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 NKX6-3A6NJ46 265 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 SPRY1O43609 319 aaPredicted RBP8.22□□□□□ -1.09
GGA3-209ENST00000580646 FOXH1O75593 365 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 ZNF205O95201 554 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 IGKV1D-12P01611 117 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 PSG2P11465 335 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 GATA3P23771 443 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 CFPP27918 469 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 RBMXP38159 391 aaKnown RBP8.22□□□□□ -1.09
GGA3-209ENST00000580646 PTGFRP43088 359 aa8.22□□□□□ -1.09
GGA3-209ENST00000580646 MTNR1BP49286 362 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms