RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 C9orf50Q5SZB4 431 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 ZNF774Q6NX45 483 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 ERGIC1Q969X5 290 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 GCM1Q9NP62 436 aa9.26□□□□□ -0.93
USB1-212ENST00000566082 MCTS1Q9ULC4 181 aaKnown RBP9.26□□□□□ -0.93
USB1-212ENST00000566082 A0A096LPE4 126 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 A0A1W2PPZ6 126 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 NKX2-6A6NCS4 301 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 FTCDNL1E5RQL4 147 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 LMO7DNF2Z398 122 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 BCAT2O15382 392 aaPredicted RBP9.25□□□□□ -0.93
USB1-212ENST00000566082 DEDDO75618 318 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 MBPP02686 304 aaPredicted RBP9.25□□□□□ -0.93
USB1-212ENST00000566082 GAPDHP04406 335 aaKnown RBP9.25□□□□□ -0.93
USB1-212ENST00000566082 SLC22A18ASQ8N1D0 253 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 RHOVQ96L33 236 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 FAM117AQ9C073 453 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 ENY2Q9NPA8 101 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 IGKV1D-43A0A0B4J1Z2 117 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.25□□□□□ -0.93
USB1-212ENST00000566082 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.25□□□□□ -0.93
USB1-212ENST00000566082 H0YL77 283 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 CXCL13O43927 109 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 MSMO1Q15800 293 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 PLAC9Q5JTB6 97 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 CYB561D1Q8N8Q1 229 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 OR13D1Q8NGV5 346 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 POM121Q96HA1 1249 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 CALHM2Q9HA72 323 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 FAM206AQ9NX38 181 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 TMEM14DPA8MWL7 114 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 MS4A18H0YCH9 400 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 TNFSF11O14788 317 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 METTL15P1P0C7V9 234 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 ZNF154Q13106 437 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 MS4A18Q3C1V0 323 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 PIGYQ3MUY2 71 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 PDLIM3Q53GG5 364 aaPredicted RBP9.25□□□□□ -0.93
USB1-212ENST00000566082 RPS19BP1Q86WX3 136 aaKnown RBP9.25□□□□□ -0.93
USB1-212ENST00000566082 SLC35G3Q8N808 338 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 POC1AQ8NBT0 407 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 RARRES2Q99969 163 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 KLHDC3Q9BQ90 382 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 GPR61Q9BZJ8 451 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 ARV1Q9H2C2 271 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 PSENENQ9NZ42 101 aa9.25□□□□□ -0.93
USB1-212ENST00000566082 TCF20Q9UGU0 1960 aaKnown RBP9.24□□□□□ -0.93
USB1-212ENST00000566082 HEATR5AQ86XA9 2040 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 TRGC2P03986 189 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 APLNRP35414 380 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 SHHQ15465 462 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 RSPO4Q2I0M5 234 aaPredicted RBP9.24□□□□□ -0.93
USB1-212ENST00000566082 FAM185AQ8N0U4 392 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 LINC00469Q8N7U9 141 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 APCDD1LQ8NCL9 501 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 SPACA9Q96E40 222 aaPredicted RBP9.24□□□□□ -0.93
USB1-212ENST00000566082 KCNK17Q96T54 332 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 DOK5Q9P104 306 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 NOSIPQ9Y314 301 aaKnown RBP9.24□□□□□ -0.93
USB1-212ENST00000566082 A0A1W2PR80 420 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 DHRS7CA6NNS2 312 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 PDCD6O75340 191 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 FGF7P21781 194 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 UBE2V2Q15819 145 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 CEACAM16Q2WEN9 425 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 PACRGQ96M98 296 aaPredicted RBP9.24□□□□□ -0.93
USB1-212ENST00000566082 GPHA2Q96T91 129 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 CACNA1DQ01668 2161 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 CHST1O43916 411 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 TSPAN2O60636 221 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 SNCAP37840 140 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 ACER2Q5QJU3 275 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 OR6X1Q8NH79 312 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 OIT3Q8WWZ8 545 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 SLC39A7Q92504 469 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 SPSB2Q99619 263 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 B4GALT7Q9UBV7 327 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 CACFD1Q9UGQ2 172 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 HSF4Q9ULV5 492 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 TIMM10BQ9Y5J6 103 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 DOCK9Q9BZ29 2069 aa9.24□□□□□ -0.93
USB1-212ENST00000566082 HTTP42858 3142 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 OR6C6A6NF89 314 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 FGF16O43320 207 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 CLN5O75503 358 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 RPS2P15880 293 aaKnown RBP9.23□□□□□ -0.93
USB1-212ENST00000566082 ADCYAP1P18509 176 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 HNF1AP20823 631 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 HTD2P86397 168 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 PLAURQ03405 335 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 MRPL49Q13405 166 aaKnown RBP9.23□□□□□ -0.93
USB1-212ENST00000566082 HABP2Q14520 560 aaPredicted RBP9.23□□□□□ -0.93
USB1-212ENST00000566082 ZNF343Q6P1L6 599 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 BIVMQ86UB2 503 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 OR1F12Q8NHA8 337 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 TMEM18Q96B42 140 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 RTN4RQ9BZR6 473 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 SERTAD4Q9NUC0 356 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 MYOTQ9UBF9 498 aa9.23□□□□□ -0.93
USB1-212ENST00000566082 LHFPL6Q9Y693 200 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms