RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 PRKACAP17612 351 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 OR3A3P47888 321 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 MECP2P51608 486 aaKnown RBP11.74□□□□□ -0.53
TPM1-215ENST00000558868 LY6DQ14210 128 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 C11orf91Q3C1V1 193 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 FBXL19-AS1Q494R0 122 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 SIGIRRQ6IA17 410 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 WFDC8Q8IUA0 241 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 ARRDC1Q8N5I2 433 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 SCCPDHQ8NBX0 429 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 BEST4Q8NFU0 473 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 OR4S1Q8NGB4 309 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 OR4D10Q8NGI6 311 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 OR5H2Q8NGV7 314 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 CCDC107Q8WV48 283 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 FBXW5Q969U6 566 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 RADILQ96JH8 1075 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 FAAP24Q9BTP7 215 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 ST6GALNAC5Q9BVH7 336 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 TINAGL1Q9GZM7 467 aaPredicted RBP11.74□□□□□ -0.53
TPM1-215ENST00000558868 ZNF442Q9H7R0 627 aa11.74□□□□□ -0.53
TPM1-215ENST00000558868 A0A0A6YYJ9 748 aa11.73□□□□□ -0.53
TPM1-215ENST00000558868 PLSCR5A0PG75 271 aa11.73□□□□□ -0.53
TPM1-215ENST00000558868 ATP6V1G2-DDX39BF2Z307 99 aa11.73□□□□□ -0.53
TPM1-215ENST00000558868 NOS1APO75052 506 aaPredicted RBP11.73□□□□□ -0.53
TPM1-215ENST00000558868 ZNF735P0CB33 412 aa11.73□□□□□ -0.53
TPM1-215ENST00000558868 HRH1P35367 487 aa11.73□□□□□ -0.53
TPM1-215ENST00000558868 SNU13P55769 128 aaKnown RBP11.73□□□□□ -0.53
TPM1-215ENST00000558868 RRAS2P62070 204 aaPredicted RBP11.73□□□□□ -0.53
TPM1-215ENST00000558868 CHRFAM7AQ494W8 412 aa11.73□□□□□ -0.53
TPM1-215ENST00000558868 ATAD3CQ5T2N8 411 aa11.73□□□□□ -0.53
TPM1-215ENST00000558868 IDO2Q6ZQW0 420 aa11.73□□□□□ -0.53
TPM1-215ENST00000558868 GIMAP1Q8WWP7 306 aa11.73□□□□□ -0.53
TPM1-215ENST00000558868 DACT3Q96B18 629 aaPredicted RBP11.73□□□□□ -0.53
TPM1-215ENST00000558868 MED28Q9H204 178 aa11.73□□□□□ -0.53
TPM1-215ENST00000558868 OR51J1Q9H342 316 aa11.73□□□□□ -0.53
TPM1-215ENST00000558868 GHITMQ9H3K2 345 aa11.73□□□□□ -0.53
TPM1-215ENST00000558868 IFT22Q9H7X7 185 aa11.73□□□□□ -0.53
TPM1-215ENST00000558868 DUSP13Q9UII6 198 aa11.73□□□□□ -0.53
TPM1-215ENST00000558868 AK3Q9UIJ7 227 aa11.73□□□□□ -0.53
TPM1-215ENST00000558868 DOPEY1Q5JWR5 2465 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 IGLV3-9A0A075B6K5 115 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 MCRIP1C9JLW8 97 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 MLNRO43193 412 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 RLN1P04808 185 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 GRPP07492 148 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 PGA5P0DJD9 388 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 SRSF1Q07955 248 aaKnown RBP eCLIP11.72□□□□□ -0.532e-10■■■□□ 14.7
TPM1-215ENST00000558868 ZNF154Q13106 437 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 IKZF1Q13422 519 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 RBM39Q14498 530 aaKnown RBP11.72□□□□□ -0.53
TPM1-215ENST00000558868 SCGB2B2Q4G0G5 96 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 CD276Q5ZPR3 534 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 OR52W1Q6IF63 320 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 WDR86Q86TI4 376 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 RTN4RL2Q86UN3 420 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 ZDHHC22Q8N966 263 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 POC1AQ8NBT0 407 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 OR5AP2Q8NGF4 316 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 TMEM171Q8WVE6 324 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 SNAPC3Q92966 411 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 RNASE6Q93091 150 aaKnown RBP11.72□□□□□ -0.53
TPM1-215ENST00000558868 SCGB3A2Q96PL1 93 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 SLC6A7Q99884 636 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 SULT4A1Q9BR01 284 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 ALX4Q9H161 411 aaPredicted RBP11.72□□□□□ -0.53
TPM1-215ENST00000558868 TLNRD1Q9H1K6 362 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 RIMS4Q9H426 269 aaPredicted RBP11.72□□□□□ -0.53
TPM1-215ENST00000558868 MYOZ1Q9NP98 299 aaPredicted RBP11.72□□□□□ -0.53
TPM1-215ENST00000558868 C12orf4Q9NQ89 552 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 ZNF701Q9NV72 531 aaPredicted RBP11.72□□□□□ -0.53
TPM1-215ENST00000558868 RCC2Q9P258 522 aaKnown RBP11.72□□□□□ -0.53
TPM1-215ENST00000558868 NDRG3Q9UGV2 375 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 GLS2Q9UI32 602 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 ZNF221Q9UK13 617 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 FZR1Q9UM11 496 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 FLVCR2Q9UPI3 526 aa11.72□□□□□ -0.53
TPM1-215ENST00000558868 POM121CA8CG34 1229 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 SNRPGP15A8MWD9 76 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 H0YL77 283 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 PYCARD-AS1I3L0S3 204 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 CDIPTO14735 213 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 NXPH2O95156 264 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 PMP2P02689 132 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 THBDP07204 575 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 CD200P41217 278 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 ARPC4P59998 168 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 ERVK11-1P61568 191 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 TSPAN5P62079 268 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 GRK1Q15835 563 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 SRSF7Q16629 238 aaKnown RBP eCLIP11.71□□□□□ -0.53
TPM1-215ENST00000558868 NKPD1Q17RQ9 610 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 MICBQ29980 383 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 SPIN3Q5JUX0 258 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 GLDNQ6ZMI3 551 aaPredicted RBP11.71□□□□□ -0.53
TPM1-215ENST00000558868 Q6ZR03 302 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 LILRB4Q8NHJ6 448 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 GTF3AQ92664 365 aaKnown RBP11.71□□□□□ -0.53
TPM1-215ENST00000558868 NRIP2Q9BQI9 281 aa11.71□□□□□ -0.53
TPM1-215ENST00000558868 PPA2Q9H2U2 334 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms