RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 INMTO95050 263 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 ALX3O95076 343 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 HAND1O96004 215 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 MT-ND2P03891 347 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 TFF1P04155 84 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 ALDOBP05062 364 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 ALPLP05186 524 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 CCDC159P0C7I6 412 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 IGHV1-8P0DP01 117 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 PIPP12273 146 aaPredicted RBP5.3□□□□□ -1.56
FOXN3-205ENST00000553904 CCL3L1P16619 93 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 COX7A1P24310 79 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 AZGP1P25311 298 aaKnown RBP5.3□□□□□ -1.56
FOXN3-205ENST00000553904 BRS3P32247 399 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 CEACAM3P40198 252 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 DYNLT3P51808 116 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 GBX2P52951 348 aaPredicted RBP5.3□□□□□ -1.56
FOXN3-205ENST00000553904 PRRX1P54821 245 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 ZNF85Q03923 595 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 SRSF4Q08170 494 aaKnown RBP5.3□□□□□ -1.56
FOXN3-205ENST00000553904 PDZK1IP1Q13113 114 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 MED21Q13503 144 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 ALKBH1Q13686 389 aaKnown RBP5.3□□□□□ -1.56
FOXN3-205ENST00000553904 ZNF146Q15072 292 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 FAM189A2Q15884 450 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 SSX2Q16385 188 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 LY6EQ16553 131 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 ARSJQ5FYB0 599 aaPredicted RBP5.3□□□□□ -1.56
FOXN3-205ENST00000553904 SSX6Q7RTT6 188 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 RTN4RL2Q86UN3 420 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 SYS1Q8N2H4 156 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 PRSS35Q8N3Z0 413 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 C11orf42Q8N5U0 333 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 CHST4Q8NCG5 386 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 ZNF555Q8NEP9 628 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 ZNF596Q8TC21 504 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 CAPSLQ8WWF8 208 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 PYDC1Q8WXC3 89 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 OPALINQ96PE5 141 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 NKX3-1Q99801 234 aaPredicted RBP5.3□□□□□ -1.56
FOXN3-205ENST00000553904 GAL3ST2Q9H3Q3 398 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 ZCCHC4Q9H5U6 513 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 EXOSC4Q9NPD3 245 aaKnown RBP5.3□□□□□ -1.56
FOXN3-205ENST00000553904 PCDHB16Q9NRJ7 776 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 TAS2R3Q9NYW6 316 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 EXOGQ9Y2C4 368 aaKnown RBP5.3□□□□□ -1.56
FOXN3-205ENST00000553904 UBE2J1Q9Y385 318 aaPredicted RBP5.3□□□□□ -1.56
FOXN3-205ENST00000553904 RPL36Q9Y3U8 105 aaKnown RBP5.3□□□□□ -1.56
FOXN3-205ENST00000553904 SVEP1Q4LDE5 3571 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 WNK2Q9Y3S1 2297 aa5.3□□□□□ -1.56
FOXN3-205ENST00000553904 LOC100130705A0A1B0GUX0 176 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 IRGMA1A4Y4 181 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 TMEM212A6NML5 194 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 LEUTXA8MZ59 168 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 H3BSH0 61 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 J3QRE1 110 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 EBAG9O00559 213 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 TOR1AO14656 332 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 EI24O14681 340 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 DEGS1O15121 323 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 WIPF1O43516 503 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 ZNF737O75373 536 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 APOL3O95236 402 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 CD2P06729 351 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 HCKP08631 526 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 TMEM225BP0DP42 221 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 ZNF44P15621 663 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 PRKACAP17612 351 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 LMO1P25800 156 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 HTR1DP28221 377 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 C21orf33P30042 268 aaPredicted RBP5.29□□□□□ -1.56
FOXN3-205ENST00000553904 POU3F4P49335 361 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 CEBPDP49716 269 aaPredicted RBP5.29□□□□□ -1.56
FOXN3-205ENST00000553904 DLX1P56177 255 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 ISL1P61371 349 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 PRB3Q04118 309 aaPredicted RBP5.29□□□□□ -1.56
FOXN3-205ENST00000553904 ZNF91Q05481 1191 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 SLC34A1Q06495 639 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 SCN1BQ07699 218 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 RAB40BQ12829 278 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 EDDM3AQ14507 147 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 ZNF273Q14593 569 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 ZIK1Q3SY52 487 aaPredicted RBP5.29□□□□□ -1.56
FOXN3-205ENST00000553904 PDLIM3Q53GG5 364 aaPredicted RBP5.29□□□□□ -1.56
FOXN3-205ENST00000553904 ZNF626Q68DY1 528 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 HCP5Q6MZN7 132 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 TMPRSS11AQ6ZMR5 421 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 ZNF782Q6ZMW2 699 aaPredicted RBP5.29□□□□□ -1.56
FOXN3-205ENST00000553904 C16orf82Q7Z2V1 217 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 RDH10Q8IZV5 341 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 ABHD12Q8N2K0 398 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 CBR4Q8N4T8 237 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 OR4D6Q8NGJ1 314 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 OR5AK2Q8NH90 309 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 RHOXF1Q8NHV9 184 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 NDNFQ8TB73 568 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 CORO2AQ92828 525 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 ADAT3Q96EY9 351 aaPredicted RBP5.29□□□□□ -1.56
FOXN3-205ENST00000553904 C4orf36Q96KX1 117 aa5.29□□□□□ -1.56
FOXN3-205ENST00000553904 MBOAT4Q96T53 435 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms