RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 DOC2BQ14184 412 aa9.72□□□□□ -0.85
RAB5C-204ENST00000547517 KISS1Q15726 138 aa9.72□□□□□ -0.85
RAB5C-204ENST00000547517 TUSC1Q2TAM9 212 aa9.72□□□□□ -0.85
RAB5C-204ENST00000547517 DEFB112Q30KQ8 113 aa9.72□□□□□ -0.85
RAB5C-204ENST00000547517 CRIP3Q6Q6R5 217 aa9.72□□□□□ -0.85
RAB5C-204ENST00000547517 SATL1Q86VE3 508 aa9.72□□□□□ -0.85
RAB5C-204ENST00000547517 Q8N7P7 452 aa9.72□□□□□ -0.85
RAB5C-204ENST00000547517 SPATA3Q8NHX4 192 aa9.72□□□□□ -0.85
RAB5C-204ENST00000547517 SGCDQ92629 289 aa9.72□□□□□ -0.85
RAB5C-204ENST00000547517 ORAI1Q96D31 301 aa9.72□□□□□ -0.85
RAB5C-204ENST00000547517 PGLYRP3Q96LB9 341 aa9.72□□□□□ -0.85
RAB5C-204ENST00000547517 NKX3-1Q99801 234 aaPredicted RBP9.72□□□□□ -0.85
RAB5C-204ENST00000547517 ANKRD60Q9BZ19 345 aa9.72□□□□□ -0.85
RAB5C-204ENST00000547517 FAM192AQ9GZU8 254 aa9.72□□□□□ -0.85
RAB5C-204ENST00000547517 FAM234AQ9H0X4 552 aa9.72□□□□□ -0.85
RAB5C-204ENST00000547517 PAK1IP1Q9NWT1 392 aaPredicted RBP9.72□□□□□ -0.85
RAB5C-204ENST00000547517 SCN3BQ9NY72 215 aa9.72□□□□□ -0.85
RAB5C-204ENST00000547517 ERGIC3Q9Y282 383 aa9.72□□□□□ -0.85
RAB5C-204ENST00000547517 A0A1W2PRD5 423 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 A0A1W2PRF3 423 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 A0A1W2PRM7 423 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 MEX3AA1L020 520 aaKnown RBP9.71□□□□□ -0.86
RAB5C-204ENST00000547517 K7N7A8 449 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 M0R1W7 72 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 GABRPO00591 440 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 MAGEB3O15480 346 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 ZNF737O75373 536 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 KDM4BO94953 1096 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 ALX3O95076 343 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 TMEM225BP0DP42 221 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 GABRR1P24046 479 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 HSPA13P48723 471 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 EDDM3BP56851 147 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 BPIFB3P59826 476 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 ZP1P60852 638 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 EDDM3AQ14507 147 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 YIF1BQ5BJH7 314 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 ZNF529Q6P280 563 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 SAXO1Q8IYX7 474 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 NANOGP1Q8N7R0 232 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 OR52N4Q8NGI2 321 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 ZFAND2BQ8WV99 257 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 TNFAIP8L1Q8WVP5 186 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 MYDGFQ969H8 173 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 ZDHHC16Q969W1 377 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 CPNE2Q96FN4 548 aaPredicted RBP9.71□□□□□ -0.86
RAB5C-204ENST00000547517 DMRTB1Q96MA1 342 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 C1orf147Q96MC9 270 aaPredicted RBP9.71□□□□□ -0.86
RAB5C-204ENST00000547517 GPER1Q99527 375 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 MND1Q9BWT6 205 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 CHST6Q9GZX3 395 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 METTL8Q9H825 291 aaKnown RBP9.71□□□□□ -0.86
RAB5C-204ENST00000547517 HMG20AQ9NP66 347 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 GSTK1Q9Y2Q3 226 aa9.71□□□□□ -0.86
RAB5C-204ENST00000547517 TRBV5-5A0A0J9YX44 114 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 A0A0U1RQK1 487 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 A0A1W2PPH5 198 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 TMEM82A0PJX8 343 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 RNASEK-C17orf49H0YIS7 233 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 SIRPB1O00241 398 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 CCL3L1P16619 93 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 CELP19835 753 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 RPS11P62280 158 aaKnown RBP eCLIP9.7□□□□□ -0.86
RAB5C-204ENST00000547517 GUCA2AQ02747 115 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 ZNF273Q14593 569 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 GRK1Q15835 563 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 Q499Y3 187 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 SPIN3Q5JUX0 258 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 DDI2Q5TDH0 399 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 NCR3LG1Q68D85 454 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 TMEM200BQ69YZ2 307 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 GDPD3Q7L5L3 318 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 OR8H2Q8N162 312 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 PNKDQ8N490 385 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 ZSCAN4Q8NAM6 433 aaPredicted RBP9.7□□□□□ -0.86
RAB5C-204ENST00000547517 FAM216AQ8WUB2 273 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 CNBD2Q96M20 576 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 OR14A2Q96R54 314 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 EXOSC4Q9NPD3 245 aaKnown RBP9.7□□□□□ -0.86
RAB5C-204ENST00000547517 TNFRSF19Q9NS68 423 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 CKLFQ9UBR5 152 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 GLS2Q9UI32 602 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 PCDHGB5Q9Y5G0 923 aa9.7□□□□□ -0.86
RAB5C-204ENST00000547517 A0A1W2PPK0 400 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 MAGEA13PA6NCF6 341 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 HOXA3O43365 443 aaPredicted RBP9.69□□□□□ -0.86
RAB5C-204ENST00000547517 PSPNO60542 156 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 OR2H2O95918 312 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 ZNF44P15621 663 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 PRTN3P24158 256 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 OR3A4PP47883 348 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 SLC35A2P78381 396 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 RIPK1Q13546 671 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 ZNF146Q15072 292 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 SLC9A3R2Q15599 337 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 METAP1DQ6UB28 335 aaPredicted RBP9.69□□□□□ -0.86
RAB5C-204ENST00000547517 C17orf107Q6ZR85 190 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 PIP4P2Q8N4L2 257 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 TPRX1Q8N7U7 411 aa9.69□□□□□ -0.86
RAB5C-204ENST00000547517 OR10K1Q8NGX5 313 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms