RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 TK1P04183 234 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 HSMCR30P0CW71 290 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 ZNF44P15621 663 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 MYF6P23409 242 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 CAV3P56539 151 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 ERVFRD-1P60508 538 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 ERVK11-1P61568 191 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 RPL31P62899 125 aaKnown RBP9.1□□□□□ -0.95
DDB1-222ENST00000543627 DEFB112Q30KQ8 113 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 Q8IYB0 196 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 PARP16Q8N5Y8 322 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 NANOGP1Q8N7R0 232 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 TPRX1Q8N7U7 411 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.1□□□□□ -0.95
DDB1-222ENST00000543627 LY6G5BQ8NDX9 201 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 OR52N4Q8NGI2 321 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 OR10K1Q8NGX5 313 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 FBLIM1Q8WUP2 373 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 TNFAIP8L1Q8WVP5 186 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 ZNF48Q96MX3 618 aaPredicted RBP9.1□□□□□ -0.95
DDB1-222ENST00000543627 S100A13Q99584 98 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 MND1Q9BWT6 205 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 HES4Q9HCC6 221 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 EXOSC4Q9NPD3 245 aaKnown RBP9.1□□□□□ -0.95
DDB1-222ENST00000543627 FAM96BQ9Y3D0 163 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 PCDHGB5Q9Y5G0 923 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 KPTNQ9Y664 436 aa9.1□□□□□ -0.95
DDB1-222ENST00000543627 IGHV1-69DA0A0B4J2H0 117 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 A0A1W2PPH5 198 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 HSPB6O14558 160 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 SH2D1BO14796 132 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 HTR3BO95264 441 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 IGHV1-69P01742 117 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 MT-ND2P03891 347 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 MAS1P04201 325 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 MMP9P14780 707 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 CCL3L1P16619 93 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 VHLP40337 213 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 HSPA13P48723 471 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 TAS2R43P59537 309 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 HILS1P60008 231 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 RSU1Q15404 277 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 GRK1Q15835 563 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 DDI2Q5TDH0 399 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 TMEM200BQ69YZ2 307 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 DMKNQ6E0U4 476 aaPredicted RBP9.09□□□□□ -0.95
DDB1-222ENST00000543627 TRAPPC6BQ86SZ2 158 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 PNKDQ8N490 385 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 GCDHQ92947 438 aaPredicted RBP9.09□□□□□ -0.95
DDB1-222ENST00000543627 CPNE2Q96FN4 548 aaPredicted RBP9.09□□□□□ -0.95
DDB1-222ENST00000543627 OR14A2Q96R54 314 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 TMED9Q9BVK6 235 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 ESM1Q9NQ30 184 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 CKLFQ9UBR5 152 aa9.09□□□□□ -0.95
DDB1-222ENST00000543627 TRBV23-1A0A0A0MS06 115 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 A0A0U1RQK1 487 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 TMEM82A0PJX8 343 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 K7N7A8 449 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 GABRPO00591 440 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 DEGS1O15121 323 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 HOXA3O43365 443 aaPredicted RBP9.08□□□□□ -0.96
DDB1-222ENST00000543627 RGS10O43665 173 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 CDRT1O95170 752 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 COX7A1P24310 79 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 BDKRB2P30411 391 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 ZNF93P35789 620 aaPredicted RBP9.08□□□□□ -0.96
DDB1-222ENST00000543627 TGFBR2P37173 567 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 OR3A4PP47883 348 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 RIPK1Q13546 671 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 C11orf91Q3C1V1 193 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 Q499Y3 187 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 YIF1BQ5BJH7 314 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 METAP1DQ6UB28 335 aaPredicted RBP9.08□□□□□ -0.96
DDB1-222ENST00000543627 ZNF782Q6ZMW2 699 aaPredicted RBP9.08□□□□□ -0.96
DDB1-222ENST00000543627 USP43Q70EL4 1123 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 JAGN1Q8N5M9 183 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 Q8N7P7 452 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 ZDHHC22Q8N966 263 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 OR4S1Q8NGB4 309 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 OR5D13Q8NGL4 314 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 PPP1R35Q8TAP8 253 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 SNX22Q96L94 193 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 OR5M11Q96RB7 305 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 ANKRD60Q9BZ19 345 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 HMG20AQ9NP66 347 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 TMEM138Q9NPI0 162 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 FKBP14Q9NWM8 211 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 PAK1IP1Q9NWT1 392 aaPredicted RBP9.08□□□□□ -0.96
DDB1-222ENST00000543627 ATRQ13535 2644 aa9.08□□□□□ -0.96
DDB1-222ENST00000543627 hCG_1809904A0A1W2PP81 198 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 A0A1W2PPE2 198 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 A0A1W2PR64 198 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 A0A1W2PRV1 198 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 MEIOCA2RUB1 952 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 DNAJC9-AS1A6NH13 148 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 RNASEK-C17orf49H0YIS7 233 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 KDM4BO94953 1096 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 OR2H2O95918 312 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 PAHP00439 452 aa9.07□□□□□ -0.96
DDB1-222ENST00000543627 CSTBP04080 98 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms