RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 SSUH2Q9Y2M2 353 aa17.14■□□□□ 0.33
SUDS3-204ENST00000543473 AQP7P3A6NL99 342 aa17.14■□□□□ 0.33
SUDS3-204ENST00000543473 B4DEV8 164 aa17.14■□□□□ 0.33
SUDS3-204ENST00000543473 RRADP55042 308 aa17.14■□□□□ 0.33
SUDS3-204ENST00000543473 SLC38A11Q08AI6 406 aa17.14■□□□□ 0.33
SUDS3-204ENST00000543473 CEACAM16Q2WEN9 425 aa17.14■□□□□ 0.33
SUDS3-204ENST00000543473 OR10A7Q8NGE5 316 aa17.14■□□□□ 0.33
SUDS3-204ENST00000543473 ROBO4Q8WZ75 1007 aa17.14■□□□□ 0.33
SUDS3-204ENST00000543473 TECTBQ96PL2 329 aa17.14■□□□□ 0.33
SUDS3-204ENST00000543473 ARL2-SNX15V9GYD0 113 aa17.14■□□□□ 0.33
SUDS3-204ENST00000543473 IGHV1OR15-9A0A0B4J2B8 117 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 PIN1P1O15428 100 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 KIR3DL2P43630 455 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 GPR12P47775 334 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 SULT1A2P50226 295 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 DYNLT3P51808 116 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 ERVFC1-1P60608 527 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 TMEM183BQ1AE95 376 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 VHLLQ6RSH7 139 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 CMTM2Q8TAZ6 248 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 IL22RA2Q969J5 263 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 WDR13Q9H1Z4 485 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 ERRFI1Q9UJM3 462 aaPredicted RBP17.13■□□□□ 0.33
SUDS3-204ENST00000543473 MMP7P09237 267 aaPredicted RBP17.13■□□□□ 0.33
SUDS3-204ENST00000543473 PMCHP20382 165 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 HRKO00198 91 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 CYR61O00622 381 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 TNFSF11O14788 317 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 KIR2DL1P43626 348 aaPredicted RBP17.13■□□□□ 0.33
SUDS3-204ENST00000543473 ZNF816Q0VGE8 651 aaPredicted RBP17.13■□□□□ 0.33
SUDS3-204ENST00000543473 OR5H15A6NDH6 313 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 OR5H1A6NKK0 313 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 CT45A6P0DMU7 189 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 CT45A5P0DMU8 189 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 CT45A7P0DMV0 189 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 CT45A8P0DMV1 189 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 CT45A9P0DMV2 189 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 OR8G1Q15617 311 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 CT45A2Q5DJT8 189 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 CT45A1Q5HYN5 189 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 FFAR4Q5NUL3 377 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 OR2T10Q8NGZ9 312 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 CT45A3Q8NHU0 189 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 PTX4Q96A99 478 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 CLDN23Q96B33 292 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 TAAR9Q96RI9 348 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 CDX2Q99626 313 aaPredicted RBP17.13■□□□□ 0.33
SUDS3-204ENST00000543473 OR51M1Q9H341 326 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 ZMIZ1Q9ULJ6 1067 aa17.13■□□□□ 0.33
SUDS3-204ENST00000543473 TERTO14746 1132 aaKnown RBP17.12■□□□□ 0.33
SUDS3-204ENST00000543473 RECKO95980 971 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 SPACA9Q96E40 222 aaPredicted RBP17.12■□□□□ 0.33
SUDS3-204ENST00000543473 FER1L6-AS2Q96M78 137 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 Q9N2K0 584 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 CACNG5Q9UF02 275 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 SCN3AQ9NY46 2000 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 A0A1W2PPC1 479 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 SEMA7AO75326 666 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 GPM6AP51674 278 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 ZP1P60852 638 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 PPP1CAP62136 330 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 OR5AC2Q9NZP5 309 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 RPS16P62249 146 aaKnown RBP17.12■□□□□ 0.33
SUDS3-204ENST00000543473 SLC24A4Q8NFF2 622 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 TWSG1Q9GZX9 223 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 TET1Q8NFU7 2136 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 ZBTB25P24278 435 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 S100A7AQ86SG5 101 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 OIT3Q8WWZ8 545 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 FOXB1Q99853 325 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 SLC25A22Q9H936 323 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 NAT8Q9UHE5 227 aa17.12■□□□□ 0.33
SUDS3-204ENST00000543473 TRBV5-5A0A0J9YX44 114 aa17.11■□□□□ 0.33
SUDS3-204ENST00000543473 MMP16P51512 607 aa17.11■□□□□ 0.33
SUDS3-204ENST00000543473 RAB35Q15286 201 aa17.11■□□□□ 0.33
SUDS3-204ENST00000543473 MPV17LQ2QL34 196 aa17.11■□□□□ 0.33
SUDS3-204ENST00000543473 LYZL2Q7Z4W2 148 aa17.11■□□□□ 0.33
SUDS3-204ENST00000543473 LYRM2Q9NU23 88 aaPredicted RBP17.11■□□□□ 0.33
SUDS3-204ENST00000543473 CD81P60033 236 aa17.11■□□□□ 0.33
SUDS3-204ENST00000543473 SRSF5Q13243 272 aaKnown RBP17.11■□□□□ 0.33
SUDS3-204ENST00000543473 KMT5CQ86Y97 462 aa17.11■□□□□ 0.33
SUDS3-204ENST00000543473 CA5BP1Q8WTZ4 195 aa17.11■□□□□ 0.33
SUDS3-204ENST00000543473 PITPNC1Q9UKF7 332 aa17.11■□□□□ 0.33
SUDS3-204ENST00000543473 DUXBA0A1W2PPF3 345 aa17.11■□□□□ 0.33
SUDS3-204ENST00000543473 GEMIN2O14893 280 aaKnown RBP17.11■□□□□ 0.33
SUDS3-204ENST00000543473 GPR3P46089 330 aa17.11■□□□□ 0.33
SUDS3-204ENST00000543473 INSM1Q01101 510 aaPredicted RBP17.11■□□□□ 0.33
SUDS3-204ENST00000543473 C6orf15Q6UXA7 325 aaPredicted RBP17.11■□□□□ 0.33
SUDS3-204ENST00000543473 OR4C5Q8NGB2 326 aa17.11■□□□□ 0.33
SUDS3-204ENST00000543473 UBALD1Q8TB05 177 aa17.11■□□□□ 0.33
SUDS3-204ENST00000543473 GPBAR1Q8TDU6 330 aa17.11■□□□□ 0.33
SUDS3-204ENST00000543473 MS4A3Q96HJ5 214 aa17.11■□□□□ 0.33
SUDS3-204ENST00000543473 SLC35E1Q96K37 410 aa17.11■□□□□ 0.33
SUDS3-204ENST00000543473 CCDC74BQ96LY2 380 aa17.11■□□□□ 0.33
SUDS3-204ENST00000543473 KCNK7Q9Y2U2 307 aa17.11■□□□□ 0.33
SUDS3-204ENST00000543473 EIF3GO75821 320 aaKnown RBP eCLIP17.1■□□□□ 0.33
SUDS3-204ENST00000543473 CELA2BP08218 269 aaPredicted RBP17.1■□□□□ 0.33
SUDS3-204ENST00000543473 EWSR1Q01844 656 aaKnown RBP eCLIP17.1■□□□□ 0.33
SUDS3-204ENST00000543473 FAM78BQ5VT40 261 aa17.1■□□□□ 0.33
SUDS3-204ENST00000543473 ASB10Q8WXI3 467 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms