RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 LOC105371242A0A075B767 164 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 IGHV2-70DA0A0C4DH43 119 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 A0A1B0GW55 424 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 ENSAO43768 121 aaKnown RBP16.12■□□□□ 0.17
DDX55-207ENST00000540763 FCN3O75636 299 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 SFTPBP07988 381 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 CHRM2P08172 466 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 DUX4L2P0CJ85 424 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 DUX4L3P0CJ86 424 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 DUX4L4P0CJ87 422 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 DUX4L5P0CJ88 424 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 DUX4L6P0CJ89 424 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 DUX4L7P0CJ90 424 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 CD37P11049 281 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 PRKACAP17612 351 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 OR3A4PP47883 348 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 GPR176Q14439 515 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 NEDD8Q15843 81 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 DGUOKQ16854 277 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 GLT8D1Q68CQ7 371 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 DUX4L9Q6RFH8 374 aaPredicted RBP16.12■□□□□ 0.17
DDX55-207ENST00000540763 JAGN1Q8N5M9 183 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 TEX29Q8N6K0 151 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 S100A13Q99584 98 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 FAM192AQ9GZU8 254 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 METTL9Q9H1A3 318 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 PPIL3Q9H2H8 161 aaKnown RBP16.12■□□□□ 0.17
DDX55-207ENST00000540763 DUX4Q9UBX2 424 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 SLC25A10Q9UBX3 287 aaPredicted RBP16.12■□□□□ 0.17
DDX55-207ENST00000540763 INSIG2Q9Y5U4 225 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 DSCAML1Q8TD84 2053 aa16.12■□□□□ 0.17
DDX55-207ENST00000540763 LIPFP07098 398 aa16.11■□□□□ 0.17
DDX55-207ENST00000540763 ADRA2CP18825 462 aa16.11■□□□□ 0.17
DDX55-207ENST00000540763 HNF1AP20823 631 aa16.11■□□□□ 0.17
DDX55-207ENST00000540763 FGF9P31371 208 aaPredicted RBP16.11■□□□□ 0.17
DDX55-207ENST00000540763 RSU1Q15404 277 aa16.11■□□□□ 0.17
DDX55-207ENST00000540763 CR1LQ2VPA4 569 aa16.11■□□□□ 0.17
DDX55-207ENST00000540763 NHLRC3Q5JS37 347 aa16.11■□□□□ 0.17
DDX55-207ENST00000540763 BTNL3Q6UXE8 466 aa16.11■□□□□ 0.17
DDX55-207ENST00000540763 C1QL2Q7Z5L3 287 aa16.11■□□□□ 0.17
DDX55-207ENST00000540763 BATF2Q8N1L9 274 aa16.11■□□□□ 0.17
DDX55-207ENST00000540763 OR51T1Q8NGJ9 327 aa16.11■□□□□ 0.17
DDX55-207ENST00000540763 C8orf46Q8TAG6 207 aa16.11■□□□□ 0.17
DDX55-207ENST00000540763 ST8SIA4Q92187 359 aa16.11■□□□□ 0.17
DDX55-207ENST00000540763 CNTD2Q9H8S5 307 aa16.11■□□□□ 0.17
DDX55-207ENST00000540763 GHRLQ9UBU3 117 aa16.11■□□□□ 0.17
DDX55-207ENST00000540763 OR14J1Q9UGF5 321 aa16.11■□□□□ 0.17
DDX55-207ENST00000540763 CDC42EP3Q9UKI2 254 aa16.11■□□□□ 0.17
DDX55-207ENST00000540763 STUB1Q9UNE7 303 aa16.11■□□□□ 0.17
DDX55-207ENST00000540763 TRAV1-2A0A0B4J238 106 aa16.1■□□□□ 0.17
DDX55-207ENST00000540763 KIR2DS1A0A191URI9 304 aa16.1■□□□□ 0.17
DDX55-207ENST00000540763 C22orf46C9J442 243 aa16.1■□□□□ 0.17
DDX55-207ENST00000540763 INAFM1C9JVW0 142 aa16.1■□□□□ 0.17
DDX55-207ENST00000540763 HAND1O96004 215 aa16.1■□□□□ 0.17
DDX55-207ENST00000540763 PPIAL4GP0DN37 164 aa16.1■□□□□ 0.17
DDX55-207ENST00000540763 JUNBP17275 347 aaPredicted RBP16.1■□□□□ 0.17
DDX55-207ENST00000540763 CALRP27797 417 aaKnown RBP16.1■□□□□ 0.17
DDX55-207ENST00000540763 RANBP1P43487 201 aa16.1■□□□□ 0.17
DDX55-207ENST00000540763 IKZF1Q13422 519 aa16.1■□□□□ 0.17
DDX55-207ENST00000540763 IL13RA2Q14627 380 aa16.1■□□□□ 0.17
DDX55-207ENST00000540763 C1orf100Q5SVJ3 147 aa16.1■□□□□ 0.17
DDX55-207ENST00000540763 CHST4Q8NCG5 386 aa16.1■□□□□ 0.17
DDX55-207ENST00000540763 ZNRF1Q8ND25 227 aa16.1■□□□□ 0.17
DDX55-207ENST00000540763 TBC1D15Q8TC07 691 aa16.1■□□□□ 0.17
DDX55-207ENST00000540763 NUDT16L1Q9BRJ7 211 aaKnown RBP16.1■□□□□ 0.17
DDX55-207ENST00000540763 TMPRSS13Q9BYE2 586 aa16.1■□□□□ 0.17
DDX55-207ENST00000540763 MMP26Q9NRE1 261 aa16.1■□□□□ 0.17
DDX55-207ENST00000540763 RPUSD1Q9UJJ7 312 aaKnown RBP16.1■□□□□ 0.17
DDX55-207ENST00000540763 MRPS28Q9Y2Q9 187 aaKnown RBP16.1■□□□□ 0.17
DDX55-207ENST00000540763 TRBV23-1A0A0A0MS06 115 aa16.09■□□□□ 0.17
DDX55-207ENST00000540763 K7N7A8 449 aa16.09■□□□□ 0.17
DDX55-207ENST00000540763 SH2D1BO14796 132 aa16.09■□□□□ 0.17
DDX55-207ENST00000540763 ZNF737O75373 536 aa16.09■□□□□ 0.17
DDX55-207ENST00000540763 CSTBP04080 98 aaKnown RBP16.09■□□□□ 0.17
DDX55-207ENST00000540763 UBBP0CG47 229 aa16.09■□□□□ 0.17
DDX55-207ENST00000540763 SELLP14151 372 aa16.09■□□□□ 0.17
DDX55-207ENST00000540763 LMO1P25800 156 aa16.09■□□□□ 0.17
DDX55-207ENST00000540763 CEBPDP49716 269 aaPredicted RBP16.09■□□□□ 0.17
DDX55-207ENST00000540763 PSMD7P51665 324 aa16.09■□□□□ 0.17
DDX55-207ENST00000540763 BTN2A1Q7KYR7 527 aa16.09■□□□□ 0.17
DDX55-207ENST00000540763 LINC00596Q86U02 117 aa16.09■□□□□ 0.17
DDX55-207ENST00000540763 TMEM185AQ8NFB2 350 aa16.09■□□□□ 0.17
DDX55-207ENST00000540763 MRPS24Q96EL2 167 aaKnown RBP16.09■□□□□ 0.17
DDX55-207ENST00000540763 SNX22Q96L94 193 aa16.09■□□□□ 0.17
DDX55-207ENST00000540763 DCTN5Q9BTE1 182 aa16.09■□□□□ 0.17
DDX55-207ENST00000540763 MRI1Q9BV20 369 aa16.09■□□□□ 0.17
DDX55-207ENST00000540763 ELL3Q9HB65 397 aaPredicted RBP16.09■□□□□ 0.17
DDX55-207ENST00000540763 EXOSC4Q9NPD3 245 aaKnown RBP16.09■□□□□ 0.17
DDX55-207ENST00000540763 IL36RNQ9UBH0 155 aa16.09■□□□□ 0.17
DDX55-207ENST00000540763 GSTK1Q9Y2Q3 226 aa16.09■□□□□ 0.17
DDX55-207ENST00000540763 CDRT1O95170 752 aa16.08■□□□□ 0.16
DDX55-207ENST00000540763 TFF1P04155 84 aa16.08■□□□□ 0.16
DDX55-207ENST00000540763 TK1P04183 234 aa16.08■□□□□ 0.16
DDX55-207ENST00000540763 MYL9P24844 172 aa16.08■□□□□ 0.16
DDX55-207ENST00000540763 COL10A1Q03692 680 aa16.08■□□□□ 0.16
DDX55-207ENST00000540763 PAX8Q06710 450 aa16.08■□□□□ 0.16
DDX55-207ENST00000540763 FAM120AOSQ5T036 256 aa16.08■□□□□ 0.16
DDX55-207ENST00000540763 AWAT2Q6E213 333 aa16.08■□□□□ 0.16
DDX55-207ENST00000540763 FAHD2BQ6P2I3 314 aaPredicted RBP16.08■□□□□ 0.16
DDX55-207ENST00000540763 OR8H2Q8N162 312 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms