RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 IGHA1P01876 353 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 GABRR1P24046 479 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 NPBWR2P48146 333 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 DYNLT3P51808 116 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 CDC42P60953 191 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 ACTA2P62736 377 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 ACTG2P63267 376 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 ACTC1P68032 377 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 ACTA1P68133 377 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 HABP2Q14520 560 aaPredicted RBP13.57□□□□□ -0.24
CPSF1-207ENST00000531727 GRK1Q15835 563 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 MINOS1Q5TGZ0 78 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 TMEM244Q5VVB8 128 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 UTS2BQ765I0 119 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 TMEM219Q86XT9 240 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 OR52N4Q8NGI2 321 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 OR2G2Q8NGZ5 317 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 ADAT3Q96EY9 351 aaPredicted RBP13.57□□□□□ -0.24
CPSF1-207ENST00000531727 CHST6Q9GZX3 395 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 SERTAD4Q9NUC0 356 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 MINOS1-NBL1R4GNA1 71 aa13.57□□□□□ -0.24
CPSF1-207ENST00000531727 SAC3D1A6NKF1 404 aa13.56□□□□□ -0.24
CPSF1-207ENST00000531727 G3V4G9 280 aa13.56□□□□□ -0.24
CPSF1-207ENST00000531727 PSPNO60542 156 aa13.56□□□□□ -0.24
CPSF1-207ENST00000531727 ISG15P05161 165 aa13.56□□□□□ -0.24
CPSF1-207ENST00000531727 ATF1P18846 271 aa13.56□□□□□ -0.24
CPSF1-207ENST00000531727 BCL3P20749 454 aa13.56□□□□□ -0.24
CPSF1-207ENST00000531727 PRKACBP22694 351 aa13.56□□□□□ -0.24
CPSF1-207ENST00000531727 AZGP1P25311 298 aaKnown RBP13.56□□□□□ -0.24
CPSF1-207ENST00000531727 DUSP1P28562 367 aa13.56□□□□□ -0.24
CPSF1-207ENST00000531727 POU3F4P49335 361 aa13.56□□□□□ -0.24
CPSF1-207ENST00000531727 OR12D2P58182 307 aa13.56□□□□□ -0.24
CPSF1-207ENST00000531727 ZNF146Q15072 292 aa13.56□□□□□ -0.24
CPSF1-207ENST00000531727 BEAN1Q3B7T3 259 aa13.56□□□□□ -0.24
CPSF1-207ENST00000531727 KCTD20Q7Z5Y7 419 aa13.56□□□□□ -0.24
CPSF1-207ENST00000531727 FAM58AQ8N1B3 248 aa13.56□□□□□ -0.24
CPSF1-207ENST00000531727 ZNF676Q8N7Q3 588 aa13.56□□□□□ -0.24
CPSF1-207ENST00000531727 TPRX1Q8N7U7 411 aa13.56□□□□□ -0.24
CPSF1-207ENST00000531727 TRUB1Q8WWH5 349 aaKnown RBP13.56□□□□□ -0.24
CPSF1-207ENST00000531727 IMPAD1Q9NX62 359 aa13.56□□□□□ -0.24
CPSF1-207ENST00000531727 SESN1Q9Y6P5 492 aa13.56□□□□□ -0.24
CPSF1-207ENST00000531727 IGHV2-26A0A0B4J1V2 119 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 J3QRE1 110 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 MGST3O14880 152 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 ENTPD6O75354 484 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 FBXO24O75426 580 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 ZNF20P17024 532 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 PRKACAP17612 351 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 MTCP1P56278 107 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 SPIN3Q5JUX0 258 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 FDX2Q6P4F2 183 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 LHFPL2Q6ZUX7 228 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 OR4S1Q8NGB4 309 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 SPSB1Q96BD6 273 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 FGGYQ96C11 551 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 PRSS22Q9GZN4 317 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 TMEM133Q9H2Q1 129 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 FRRS1LQ9P0K9 344 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 GLS2Q9UI32 602 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 HILPDAQ9Y5L2 63 aa13.55□□□□□ -0.24
CPSF1-207ENST00000531727 DAPL1A0PJW8 107 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 F2RL2O00254 374 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 SLC16A6O15403 523 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 CIB2O75838 187 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 CALCBP10092 127 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 CD28P10747 220 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 ERP29P30040 261 aaKnown RBP13.54□□□□□ -0.24
CPSF1-207ENST00000531727 SNU13P55769 128 aaKnown RBP13.54□□□□□ -0.24
CPSF1-207ENST00000531727 P2RX3P56373 397 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 NANOS3P60323 173 aaKnown RBP13.54□□□□□ -0.24
CPSF1-207ENST00000531727 PDZK1IP1Q13113 114 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 SLC25A30Q5SVS4 291 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 KPRPQ5T749 579 aaPredicted RBP13.54□□□□□ -0.24
CPSF1-207ENST00000531727 SAMD5Q5TGI4 173 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 ZBTB49Q6ZSB9 765 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 LYG1Q8N1E2 194 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 NDNFQ8TB73 568 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 RNFT2Q96EX2 444 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 HRASLS5Q96KN8 279 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 OPALINQ96PE5 141 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 MBOAT4Q96T53 435 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 CLEC7AQ9BXN2 247 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 HMG20AQ9NP66 347 aa13.54□□□□□ -0.24
CPSF1-207ENST00000531727 UBE2J1Q9Y385 318 aaPredicted RBP13.54□□□□□ -0.24
CPSF1-207ENST00000531727 ALPLP05186 524 aa13.53□□□□□ -0.24
CPSF1-207ENST00000531727 HTR1AP08908 422 aa13.53□□□□□ -0.24
CPSF1-207ENST00000531727 JUNBP17275 347 aaPredicted RBP13.53□□□□□ -0.24
CPSF1-207ENST00000531727 OR3A1P47881 315 aa13.53□□□□□ -0.24
CPSF1-207ENST00000531727 CCR9P51686 369 aa13.53□□□□□ -0.24
CPSF1-207ENST00000531727 SNRPGP62308 76 aaKnown RBP13.53□□□□□ -0.24
CPSF1-207ENST00000531727 SLC34A1Q06495 639 aa13.53□□□□□ -0.24
CPSF1-207ENST00000531727 NSUN5P1Q3KNT7 163 aa13.53□□□□□ -0.24
CPSF1-207ENST00000531727 TRAPPC6BQ86SZ2 158 aa13.53□□□□□ -0.24
CPSF1-207ENST00000531727 WIPF2Q8TF74 440 aaPredicted RBP13.53□□□□□ -0.24
CPSF1-207ENST00000531727 RFT1Q96AA3 541 aa13.53□□□□□ -0.24
CPSF1-207ENST00000531727 WNT10AQ9GZT5 417 aa13.53□□□□□ -0.24
CPSF1-207ENST00000531727 EXOSC4Q9NPD3 245 aaKnown RBP13.53□□□□□ -0.24
CPSF1-207ENST00000531727 HHLA2Q9UM44 414 aa13.53□□□□□ -0.24
CPSF1-207ENST00000531727 ORC6Q9Y5N6 252 aa13.53□□□□□ -0.24
CPSF1-207ENST00000531727 IGKV1-12A0A0C4DH73 117 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms