RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 A0A1W2PQF6 199 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 CLEC18AA5D8T8 446 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 GEMIN2O14893 280 aaKnown RBP10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 POLR2GP62487 172 aaKnown RBP eCLIP10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 CSRP2Q16527 193 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 LTC4SQ16873 150 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 CEACAM16Q2WEN9 425 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 LRRC10Q5BKY1 277 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 KHDC1LQ5JSQ8 128 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 ZDHHC23Q8IYP9 409 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 CLEC18CQ8NCF0 446 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 NPEPL1Q8NDH3 523 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 RAB1CQ92928 201 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 NRIP2Q9BQI9 281 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 SLC22A13Q9Y226 551 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 R4GMQ9 66 aa10.91□□□□□ -0.66
PCDHGA6-201ENST00000517434 CHRNA7P36544 502 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 GPM6AP51674 278 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 ERVS71-1P61550 626 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 IL13RA2Q14627 380 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 KRTCAP3Q53RY4 240 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 FAM78BQ5VT40 261 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 OR51E1Q8TCB6 317 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 FBXO17Q96EF6 278 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 CTSVO60911 334 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 NRASP01111 189 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 HRASP01112 189 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 KRASP01116 189 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 GCGP01275 180 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 ZNF883P0CG24 379 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 BMP5P22003 454 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 TCTN1Q2MV58 587 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 ETV3LQ6ZN32 361 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 ANAPC16Q96DE5 110 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 MS4A3Q96HJ5 214 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 TBX15Q96SF7 602 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 PARD6GQ9BYG4 376 aaPredicted RBP10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 PARP11Q9NR21 331 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 TRBV23-1A0A0A0MS06 115 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 IGHV5-10-1A0A0J9YXX1 117 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 DLL1O00548 723 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 EIF3GO75821 320 aaKnown RBP eCLIP10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 CNN1P51911 297 aaKnown RBP10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 HMGA2P52926 109 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 DLK1P80370 383 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 ZNF345Q14585 488 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 LEMD1Q68G75 181 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 BTNL3Q6UXE8 466 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 BLNKQ8WV28 456 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 EDARADDQ8WWZ3 215 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 OR1A1Q9P1Q5 309 aa10.9□□□□□ -0.66
PCDHGA6-201ENST00000517434 NDUFB3O43676 98 aa10.9□□□□□ -0.67
PCDHGA6-201ENST00000517434 FCMRO60667 390 aa10.9□□□□□ -0.67
PCDHGA6-201ENST00000517434 HOXB1P14653 301 aaPredicted RBP10.9□□□□□ -0.67
PCDHGA6-201ENST00000517434 SRP14P37108 136 aaKnown RBP10.9□□□□□ -0.67
PCDHGA6-201ENST00000517434 TMEM33P57088 247 aa10.9□□□□□ -0.67
PCDHGA6-201ENST00000517434 SPCS3P61009 180 aa10.9□□□□□ -0.67
PCDHGA6-201ENST00000517434 GUCA2BQ16661 112 aa10.9□□□□□ -0.67
PCDHGA6-201ENST00000517434 BHLHE23Q8NDY6 225 aa10.9□□□□□ -0.67
PCDHGA6-201ENST00000517434 NOXO1Q8NFA2 376 aa10.9□□□□□ -0.67
PCDHGA6-201ENST00000517434 SPTA1P02549 2419 aa10.9□□□□□ -0.67
PCDHGA6-201ENST00000517434 CEP290O15078 2479 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 ST8SIA5O15466 376 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 GPANK1O95872 356 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 DEFA4P12838 97 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 Q1RN00 199 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 OR5AS1Q8N127 324 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 ROBO4Q8WZ75 1007 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 FAM234AQ9H0X4 552 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 SMDT1Q9H4I9 107 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 MSL2Q9HCI7 577 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 A0A087WUJ7 227 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 H3BP45 60 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 IGHA2P01877 340 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 INSM1Q01101 510 aaPredicted RBP10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 HFEQ30201 348 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 FFAR4Q5NUL3 377 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 ZNF468Q5VIY5 522 aaPredicted RBP10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 OR2D3Q8NGH3 330 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 OR10X1Q8NGY0 326 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 NEIL1Q96FI4 390 aaPredicted RBP10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 APC2O95996 2303 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 A0A096LPE4 126 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 A0A1W2PPZ6 126 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 WDR1O75083 606 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 ZNF253O75346 499 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 PPOXP50336 477 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 RTL8BQ17RB0 113 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 MRGPREQ86SM8 312 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 OR2C3Q8N628 320 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 TMEM251Q8N6I4 163 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 DNASE2BQ8WZ79 361 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 RHOVQ96L33 236 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 PRSS50Q9UI38 385 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 RNF24Q9Y225 148 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 SERTM2A0A1B0GWG4 89 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 DRAM2Q6UX65 266 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 OR13G1Q8NGZ3 307 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 TTC3P53804 2025 aa10.89□□□□□ -0.67
PCDHGA6-201ENST00000517434 MPTX1A8MV57 137 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms