RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 HSPE1-MOB4S4R3N1 261 aa16.03■□□□□ 0.16
SQSTM1-215ENST00000514093 SERPINE3A8MV23 424 aa16.02■□□□□ 0.16
SQSTM1-215ENST00000514093 PRODHO43272 600 aa16.02■□□□□ 0.16
SQSTM1-215ENST00000514093 CALCBP10092 127 aa16.02■□□□□ 0.16
SQSTM1-215ENST00000514093 LYL1P12980 280 aa16.02■□□□□ 0.16
SQSTM1-215ENST00000514093 GINS1Q14691 196 aa16.02■□□□□ 0.16
SQSTM1-215ENST00000514093 DEFB136Q30KP8 78 aa16.02■□□□□ 0.16
SQSTM1-215ENST00000514093 UTF1Q5T230 341 aa16.02■□□□□ 0.16
SQSTM1-215ENST00000514093 TPTE2P1Q5T6R2 138 aa16.02■□□□□ 0.16
SQSTM1-215ENST00000514093 OR10G2Q8NGC3 310 aa16.02■□□□□ 0.16
SQSTM1-215ENST00000514093 CHPT1Q8WUD6 406 aa16.02■□□□□ 0.16
SQSTM1-215ENST00000514093 RCHY1Q96PM5 261 aa16.02■□□□□ 0.16
SQSTM1-215ENST00000514093 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.02■□□□□ 0.164e-8■■□□□ 14.3
SQSTM1-215ENST00000514093 COPS3Q9UNS2 423 aa16.02■□□□□ 0.16
SQSTM1-215ENST00000514093 V9GYS6 101 aa16.02■□□□□ 0.16
SQSTM1-215ENST00000514093 IGKV1-27A0A075B6S5 117 aa16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 A0A1B0GTI1 187 aa16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 H3BSH0 61 aa16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 BUB1B-PAK6H3BSN5 160 aa16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 MAGEB4O15481 346 aaPredicted RBP16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 SLC6A1P30531 599 aa16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 MAGEA2P43356 314 aa16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 SNU13P55769 128 aaKnown RBP16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 RBM39Q14498 530 aaKnown RBP16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 ZNF829Q3KNS6 432 aaPredicted RBP16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 C9orf66Q5T8R8 295 aa16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 OR52W1Q6IF63 320 aa16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 CD300LDQ6UXZ3 194 aa16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 RTN4RL2Q86UN3 420 aa16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 SBSPONQ8IVN8 264 aa16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 ZNF679Q8IYX0 411 aa16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 EMG1Q92979 244 aaKnown RBP16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 YIPF3Q9GZM5 350 aa16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 REEP1Q9H902 201 aa16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 PALMDQ9NP74 551 aa16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 DNAJB9Q9UBS3 223 aa16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 SCOCQ9UIL1 159 aa16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 IKZF2Q9UKS7 526 aa16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 UBE2J1Q9Y385 318 aaPredicted RBP16.01■□□□□ 0.15
SQSTM1-215ENST00000514093 TOR1AO14656 332 aa16■□□□□ 0.15
SQSTM1-215ENST00000514093 SASH3O75995 380 aa16■□□□□ 0.15
SQSTM1-215ENST00000514093 FAM106CPP0CH98 169 aa16■□□□□ 0.15
SQSTM1-215ENST00000514093 CHATP28329 748 aa16■□□□□ 0.15
SQSTM1-215ENST00000514093 CEACAM3P40198 252 aa16■□□□□ 0.15
SQSTM1-215ENST00000514093 RIDAP52758 137 aaKnown RBP16■□□□□ 0.15
SQSTM1-215ENST00000514093 GP2P55259 537 aaKnown RBP16■□□□□ 0.15
SQSTM1-215ENST00000514093 P2RX3P56373 397 aa16■□□□□ 0.15
SQSTM1-215ENST00000514093 APOFQ13790 326 aa16■□□□□ 0.15
SQSTM1-215ENST00000514093 HLA-DRB5Q30154 266 aa16■□□□□ 0.15
SQSTM1-215ENST00000514093 SLC35D3Q5M8T2 416 aa16■□□□□ 0.15
SQSTM1-215ENST00000514093 SLX4IPQ5VYV7 408 aa16■□□□□ 0.15
SQSTM1-215ENST00000514093 OR2T5Q6IEZ7 315 aa16■□□□□ 0.15
SQSTM1-215ENST00000514093 PLEKHG7Q6ZR37 379 aa16■□□□□ 0.15
SQSTM1-215ENST00000514093 SLC25A26Q70HW3 274 aa16■□□□□ 0.15
SQSTM1-215ENST00000514093 OR2T29Q8NH02 315 aa16■□□□□ 0.15
SQSTM1-215ENST00000514093 FEVQ99581 238 aa16■□□□□ 0.15
SQSTM1-215ENST00000514093 SEC14L6B5MCN3 397 aa15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 LOC110117498-PIK3R3F6TDL0 507 aa15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 LY6LH3BQJ8 138 aa15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 ZNF254O75437 659 aa15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 SRSF10O75494 262 aaKnown RBP15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 ATP6V1B2P21281 511 aa15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 SLC2A5P22732 501 aa15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 MNDAP41218 407 aa15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 SLC35B1P78383 322 aa15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 ROM1Q03395 351 aa15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 ZNF91Q05481 1191 aa15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 UBE2V2Q15819 145 aa15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 ZFAND6Q6FIF0 208 aa15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 HEPN1Q6WQI6 88 aa15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 LCNL1Q6ZST4 164 aa15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 OR5M8Q8NGP6 311 aa15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 DCLRE1BQ9H816 532 aa15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 RBFOX1Q9NWB1 397 aaKnown RBP15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 SLC7A11Q9UPY5 501 aa15.99■□□□□ 0.15
SQSTM1-215ENST00000514093 LINC01548A6NM66 108 aa15.98■□□□□ 0.15
SQSTM1-215ENST00000514093 SIRPB1O00241 398 aa15.98■□□□□ 0.15
SQSTM1-215ENST00000514093 MGST3O14880 152 aa15.98■□□□□ 0.15
SQSTM1-215ENST00000514093 RPLP1P05386 114 aaKnown RBP15.98■□□□□ 0.15
SQSTM1-215ENST00000514093 PRDX6P30041 224 aa15.98■□□□□ 0.15
SQSTM1-215ENST00000514093 OR3A1P47881 315 aa15.98■□□□□ 0.15
SQSTM1-215ENST00000514093 NPBWR2P48146 333 aa15.98■□□□□ 0.15
SQSTM1-215ENST00000514093 HNF4GQ14541 408 aa15.98■□□□□ 0.15
SQSTM1-215ENST00000514093 BCL2L15Q5TBC7 163 aa15.98■□□□□ 0.15
SQSTM1-215ENST00000514093 ELMOD2Q8IZ81 293 aa15.98■□□□□ 0.15
SQSTM1-215ENST00000514093 PGAM4Q8N0Y7 254 aa15.98■□□□□ 0.15
SQSTM1-215ENST00000514093 C5orf56Q8N8D9 126 aa15.98■□□□□ 0.15
SQSTM1-215ENST00000514093 APOL4Q9BPW4 351 aa15.98■□□□□ 0.15
SQSTM1-215ENST00000514093 GAL3ST2Q9H3Q3 398 aa15.98■□□□□ 0.15
SQSTM1-215ENST00000514093 OR52A1Q9UKL2 312 aa15.98■□□□□ 0.15
SQSTM1-215ENST00000514093 KIAA2026Q5HYC2 2103 aa15.97■□□□□ 0.15
SQSTM1-215ENST00000514093 TRGV10A0A0A0MS01 117 aa15.97■□□□□ 0.15
SQSTM1-215ENST00000514093 LY86O95711 162 aa15.97■□□□□ 0.15
SQSTM1-215ENST00000514093 HES1Q14469 280 aa15.97■□□□□ 0.15
SQSTM1-215ENST00000514093 KPNB1Q14974 876 aaKnown RBP15.97■□□□□ 0.15
SQSTM1-215ENST00000514093 ODF4Q2M2E3 257 aa15.97■□□□□ 0.15
SQSTM1-215ENST00000514093 CCDC144NLQ6NUI1 221 aa15.97■□□□□ 0.15
SQSTM1-215ENST00000514093 SLC35E3Q7Z769 313 aa15.97■□□□□ 0.15
SQSTM1-215ENST00000514093 OR56B4Q8NH76 319 aa15.97■□□□□ 0.15
SQSTM1-215ENST00000514093 GIPC3Q8TF64 312 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms