RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 PTGFRP43088 359 aa9.22□□□□□ -0.93
APTX-230ENST00000494649 RSU1Q15404 277 aa9.22□□□□□ -0.93
APTX-230ENST00000494649 PIGYQ3MUY2 71 aa9.22□□□□□ -0.93
APTX-230ENST00000494649 SLC22A6Q4U2R8 563 aa9.22□□□□□ -0.93
APTX-230ENST00000494649 LRRC10Q5BKY1 277 aa9.22□□□□□ -0.93
APTX-230ENST00000494649 C22orf42Q6IC83 251 aa9.22□□□□□ -0.93
APTX-230ENST00000494649 UNQ9370/PRO34162Q6UXP9 181 aa9.22□□□□□ -0.93
APTX-230ENST00000494649 TPRX1Q8N7U7 411 aa9.22□□□□□ -0.93
APTX-230ENST00000494649 C22orf15Q8WYQ4 148 aa9.22□□□□□ -0.93
APTX-230ENST00000494649 NUDT16L1Q9BRJ7 211 aaKnown RBP9.22□□□□□ -0.93
APTX-230ENST00000494649 BEX2Q9BXY8 128 aa9.22□□□□□ -0.93
APTX-230ENST00000494649 TMPRSS13Q9BYE2 586 aa9.22□□□□□ -0.93
APTX-230ENST00000494649 SHARPINQ9H0F6 387 aa9.22□□□□□ -0.93
APTX-230ENST00000494649 NDUFB11Q9NX14 153 aa9.22□□□□□ -0.93
APTX-230ENST00000494649 RASL12Q9NYN1 266 aa9.22□□□□□ -0.93
APTX-230ENST00000494649 FOXJ3Q9UPW0 622 aa9.22□□□□□ -0.93
APTX-230ENST00000494649 AK6Q9Y3D8 172 aaKnown RBP9.22□□□□□ -0.93
APTX-230ENST00000494649 MRPS14O60783 128 aaKnown RBP9.21□□□□□ -0.93
APTX-230ENST00000494649 KDM4BO94953 1096 aa9.21□□□□□ -0.93
APTX-230ENST00000494649 HAND1O96004 215 aa9.21□□□□□ -0.93
APTX-230ENST00000494649 UCHL1P09936 223 aa9.21□□□□□ -0.93
APTX-230ENST00000494649 GABRR1P24046 479 aa9.21□□□□□ -0.93
APTX-230ENST00000494649 EDDM3AQ14507 147 aa9.21□□□□□ -0.93
APTX-230ENST00000494649 AWAT2Q6E213 333 aa9.21□□□□□ -0.93
APTX-230ENST00000494649 GLIPR1L1Q6UWM5 242 aa9.21□□□□□ -0.93
APTX-230ENST00000494649 LRRTM1Q86UE6 522 aa9.21□□□□□ -0.93
APTX-230ENST00000494649 PDZD9Q8IXQ8 264 aa9.21□□□□□ -0.93
APTX-230ENST00000494649 PNLDC1Q8NA58 520 aaKnown RBP9.21□□□□□ -0.93
APTX-230ENST00000494649 RAB40AQ8WXH6 277 aa9.21□□□□□ -0.93
APTX-230ENST00000494649 FAM46BQ96A09 425 aa9.21□□□□□ -0.93
APTX-230ENST00000494649 CYYR1Q96J86 154 aa9.21□□□□□ -0.93
APTX-230ENST00000494649 S100A13Q99584 98 aa9.21□□□□□ -0.93
APTX-230ENST00000494649 RNF167Q9H6Y7 350 aa9.21□□□□□ -0.93
APTX-230ENST00000494649 HMG20AQ9NP66 347 aa9.21□□□□□ -0.93
APTX-230ENST00000494649 KAAG1Q9UBP8 84 aa9.21□□□□□ -0.93
APTX-230ENST00000494649 MRPS28Q9Y2Q9 187 aaKnown RBP9.21□□□□□ -0.93
APTX-230ENST00000494649 IGHV2-70DA0A0C4DH43 119 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 SHISA3A0PJX4 238 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 A8MXK9 166 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 PSPNO60542 156 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 KNG1P01042 644 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 ZNF44P15621 663 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 EDDM3BP56851 147 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 ARF6P62330 175 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 ATPAF1Q5TC12 328 aaPredicted RBP9.2□□□□□ -0.94
APTX-230ENST00000494649 BTNL3Q6UXE8 466 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 FCGR1BQ92637 280 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 PCGF1Q9BSM1 259 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 OR51E2Q9H255 320 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 BANF2Q9H503 90 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 ONECUT1Q9UBC0 465 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 INSIG2Q9Y5U4 225 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 LOC100506127A0A0U1RQW1 187 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 OR2H2O95918 312 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 CSTBP04080 98 aaKnown RBP9.2□□□□□ -0.94
APTX-230ENST00000494649 ALDOBP05062 364 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 CLDN12P56749 244 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 OR10A3P58181 314 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 ERVFRD-1P60508 538 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 PAX2Q02962 417 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 CHRFAM7AQ494W8 412 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 OR10K2Q6IF99 312 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 BRICD5Q6PL45 260 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 Q8IYB0 196 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 FAM185AQ8N0U4 392 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 CPNE2Q96FN4 548 aaPredicted RBP9.2□□□□□ -0.94
APTX-230ENST00000494649 SDSLQ96GA7 329 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 MED30Q96HR3 178 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 GFI1Q99684 422 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 CHCHD6Q9BRQ6 235 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 C19orf12Q9NSK7 152 aa9.2□□□□□ -0.94
APTX-230ENST00000494649 A0A087WXM4 84 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 A0A1W2PQ09 198 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 TMEM82A0PJX8 343 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 GPX5O75715 221 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 TK1P04183 234 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 SRP14P37108 136 aaKnown RBP9.19□□□□□ -0.94
APTX-230ENST00000494649 NPY4RP50391 375 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 FGF12P61328 243 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 FIP1L1Q6UN15 594 aaKnown RBP9.19□□□□□ -0.94
APTX-230ENST00000494649 BPIFB2Q8N4F0 458 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 ZNF561Q8N587 486 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 SLITRK2Q9H156 845 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 METTL9Q9H1A3 318 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 PPA2Q9H2U2 334 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 ZNF696Q9H7X3 374 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 OPN4Q9UHM6 478 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 RPUSD1Q9UJJ7 312 aaKnown RBP9.19□□□□□ -0.94
APTX-230ENST00000494649 AUP1Q9Y679 476 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 PPIAL4CA0A0B4J2A2 164 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 ENSAO43768 121 aaKnown RBP9.19□□□□□ -0.94
APTX-230ENST00000494649 CRLF1O75462 422 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 ARL6IP5O75915 188 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 PPIAL4GP0DN37 164 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 CD36P16671 472 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 GADD45AP24522 165 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 PSMA1P25786 263 aaKnown RBP9.19□□□□□ -0.94
APTX-230ENST00000494649 TGFBR1P36897 503 aa9.19□□□□□ -0.94
APTX-230ENST00000494649 SRSF2Q01130 221 aaKnown RBP9.19□□□□□ -0.94
APTX-230ENST00000494649 ATXN7L3Q14CW9 347 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms