RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 K7N7A8 449 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 SIRPB1O00241 398 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 SULT1B1O43704 296 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 GPR137BO60478 399 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 FCN3O75636 299 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 IGHA1P01876 353 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 ZNF44P15621 663 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 RAB3AP20336 220 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 BCL3P20749 454 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 IER3P46695 156 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 SOX2P48431 317 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 PDZK1IP1Q13113 114 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 TMEM200BQ69YZ2 307 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 BRICD5Q6PL45 260 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 ZNF782Q6ZMW2 699 aaPredicted RBP7.48□□□□□ -1.21
HDAC6-232ENST00000489053 Q6ZSR3 168 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 LDLRAD3Q86YD5 345 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 C8orf59Q8N0T1 100 aaPredicted RBP7.48□□□□□ -1.21
HDAC6-232ENST00000489053 OR8H2Q8N162 312 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 PNKDQ8N490 385 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 PIP4P2Q8N4L2 257 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 Q8N7P7 452 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 OR5D18Q8NGL1 313 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 GPR148Q8TDV2 347 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 FOXRED1Q96CU9 486 aaPredicted RBP7.48□□□□□ -1.21
HDAC6-232ENST00000489053 SNX22Q96L94 193 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 ZNF714Q96N38 554 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 PDCD1LG2Q9BQ51 273 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 PRDM13Q9H4Q3 707 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 ISG20L2Q9H9L3 353 aaKnown RBP7.48□□□□□ -1.21
HDAC6-232ENST00000489053 HES4Q9HCC6 221 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 RBFOX1Q9NWB1 397 aaKnown RBP7.48□□□□□ -1.21
HDAC6-232ENST00000489053 VPREB3Q9UKI3 123 aa7.48□□□□□ -1.21
HDAC6-232ENST00000489053 DOCK11Q5JSL3 2073 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 IGKV1-27A0A075B6S5 117 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 TRGV10A0A0A0MS01 117 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 EFCAB10A6NFE3 127 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 MYL12BO14950 172 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 ZFPL1O95159 310 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 ARG1P05089 322 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 ZNF728P0DKX0 622 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 CALCBP10092 127 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 CCL3L1P16619 93 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 GABRB1P18505 474 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 MDKP21741 143 aaPredicted RBP7.47□□□□□ -1.21
HDAC6-232ENST00000489053 DUSP1P28562 367 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 TGFBR2P37173 567 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 BMXP51813 675 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 ARHGDIBP52566 201 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 ERVK11-1P61568 191 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 MEF2CQ06413 473 aaPredicted RBP7.47□□□□□ -1.21
HDAC6-232ENST00000489053 IL18R1Q13478 541 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 RSU1Q15404 277 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 LRRC75BQ2VPJ9 315 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 CCDC58Q4VC31 144 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 ARSJQ5FYB0 599 aaPredicted RBP7.47□□□□□ -1.21
HDAC6-232ENST00000489053 ZNF691Q5VV52 312 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 OLFML2AQ68BL7 652 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 RPL22L1Q6P5R6 122 aaKnown RBP7.47□□□□□ -1.21
HDAC6-232ENST00000489053 DTX3Q8N9I9 347 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 OR51A4Q8NGJ6 313 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 OR4C13Q8NGP0 309 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 NDNFQ8TB73 568 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 CNIH3Q8TBE1 160 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 TMEM80Q96HE8 168 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 SPACA5Q96QH8 159 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 CHST6Q9GZX3 395 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 GAL3ST2Q9H3Q3 398 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 RHOFQ9HBH0 211 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 C1RLQ9NZP8 487 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.47□□□□□ -1.21
HDAC6-232ENST00000489053 ZNRD1Q9P1U0 126 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 PKD1L1Q8TDX9 2849 aa7.47□□□□□ -1.21
HDAC6-232ENST00000489053 IGKV1-9A0A0C4DH69 117 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 MEX3AA1L020 520 aaKnown RBP7.46□□□□□ -1.22
HDAC6-232ENST00000489053 CLPSL1A2RUU4 121 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 H3BUX3 64 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 MGST3O14880 152 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 DEGS1O15121 323 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 PEX14O75381 377 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 NDUFA7O95182 113 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 CLIC3O95833 236 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 RBP4P02753 201 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 MT-ND2P03891 347 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 NPBWR2P48146 333 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 DLX1P56177 255 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 ZNF273Q14593 569 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 KISS1Q15726 138 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 LY6EQ16553 131 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 SMN1Q16637 294 aaKnown RBP7.46□□□□□ -1.22
HDAC6-232ENST00000489053 TUSC1Q2TAM9 212 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 PLA1AQ53H76 456 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 SAXO1Q8IYX7 474 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 STX19Q8N4C7 294 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 CHST4Q8NCG5 386 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 BEND2Q8NDZ0 799 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 OR10AC1Q8NH08 325 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 TNFAIP8L1Q8WVP5 186 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 APH1BQ8WW43 257 aa7.46□□□□□ -1.22
HDAC6-232ENST00000489053 CAPSLQ8WWF8 208 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms