RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 PRKACAP17612 351 aa9.29□□□□□ -0.92
HDLBP-242ENST00000488013 MDH2P40926 338 aaKnown RBP9.29□□□□□ -0.92
HDLBP-242ENST00000488013 ETV6P41212 452 aa9.29□□□□□ -0.92
HDLBP-242ENST00000488013 MNDAP41218 407 aa9.29□□□□□ -0.92
HDLBP-242ENST00000488013 NPBWR2P48146 333 aa9.29□□□□□ -0.92
HDLBP-242ENST00000488013 ATP5J2P56134 94 aa9.29□□□□□ -0.92
HDLBP-242ENST00000488013 MRPS10P82664 201 aaKnown RBP9.29□□□□□ -0.92
HDLBP-242ENST00000488013 ZNF45Q02386 682 aa9.29□□□□□ -0.92
HDLBP-242ENST00000488013 UNC119Q13432 240 aa9.29□□□□□ -0.92
HDLBP-242ENST00000488013 RBM39Q14498 530 aaKnown RBP9.29□□□□□ -0.92
HDLBP-242ENST00000488013 ATPAF1Q5TC12 328 aaPredicted RBP9.29□□□□□ -0.92
HDLBP-242ENST00000488013 GCSAMQ8N6F7 178 aa9.29□□□□□ -0.92
HDLBP-242ENST00000488013 TMEM104Q8NE00 496 aa9.29□□□□□ -0.92
HDLBP-242ENST00000488013 MED30Q96HR3 178 aa9.29□□□□□ -0.92
HDLBP-242ENST00000488013 DIRAS2Q96HU8 199 aa9.29□□□□□ -0.92
HDLBP-242ENST00000488013 HSF4Q9ULV5 492 aa9.29□□□□□ -0.92
HDLBP-242ENST00000488013 ICE1Q9Y2F5 2266 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 A0A0B4J203 849 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 NKX6-3A6NJ46 265 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 OR2AT4A6NND4 320 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 H7C1Q1 480 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 CTDSP2O14595 271 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 HPGDSO60760 199 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 CA11O75493 328 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 RP2O75695 350 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 OR7C1O76099 320 aaPredicted RBP9.28□□□□□ -0.92
HDLBP-242ENST00000488013 FUT3P21217 361 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 CDKN1AP38936 164 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 PDLIM4P50479 330 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 BTG1P62324 171 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 C11orf91Q3C1V1 193 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 TMEM155Q4W5P6 130 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 TMEM69Q5SWH9 247 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 SLC36A1Q7Z2H8 476 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 RNF144BQ7Z419 303 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 ZNF561Q8N587 486 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 SPICQ8N5J4 248 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 OR5H6Q8NGV6 325 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 OR10K1Q8NGX5 313 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 OR10R2Q8NGX6 335 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 RAB3CQ96E17 227 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 FAM234AQ9H0X4 552 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 LPAR5Q9H1C0 372 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 RIMS4Q9H426 269 aaPredicted RBP9.28□□□□□ -0.92
HDLBP-242ENST00000488013 BANF2Q9H503 90 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 WIPI2Q9Y4P8 454 aa9.28□□□□□ -0.92
HDLBP-242ENST00000488013 FUOMA2VDF0 154 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 FABP12A6NFH5 140 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 MCRIP1C9JLW8 97 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 RAB27BO00194 218 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 PDCD6O75340 191 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 HAND1O96004 215 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 CYB5R3P00387 301 aaPredicted RBP9.27□□□□□ -0.93
HDLBP-242ENST00000488013 GSTP1P09211 210 aaKnown RBP9.27□□□□□ -0.93
HDLBP-242ENST00000488013 ZNF44P15621 663 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 ELK1P19419 428 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 LMO1P25800 156 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 GIFP27352 417 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 BLVRBP30043 206 aaPredicted RBP9.27□□□□□ -0.93
HDLBP-242ENST00000488013 PRDX2P32119 198 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 TNFSF8P32971 234 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 PTH2RP49190 550 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 MRPS15P82914 257 aaKnown RBP9.27□□□□□ -0.93
HDLBP-242ENST00000488013 IKZF1Q13422 519 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 TAF9Q16594 264 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 PNLIPRP3Q17RR3 467 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 SHEQ5VZ18 495 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 OR10K2Q6IF99 312 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 PYHIN1Q6K0P9 492 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 CLEC2AQ6UVW9 174 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 PRSS57Q6UWY2 283 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 DCDC5Q6ZRR9 648 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 Q6ZTK2 550 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 NLRC3Q7RTR2 1065 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 CMTM4Q8IZR5 234 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 BOLLQ8N9W6 283 aaKnown RBP9.27□□□□□ -0.93
HDLBP-242ENST00000488013 OR5D13Q8NGL4 314 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 SLC25A38Q96DW6 304 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 SDSLQ96GA7 329 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 ZNF488Q96MN9 340 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 NKX3-1Q99801 234 aaPredicted RBP9.27□□□□□ -0.93
HDLBP-242ENST00000488013 WDR12Q9GZL7 423 aaKnown RBP9.27□□□□□ -0.93
HDLBP-242ENST00000488013 ZNF665Q9H7R5 613 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.27□□□□□ -0.93
HDLBP-242ENST00000488013 PLEKHJ1Q9NW61 149 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 TREM2Q9NZC2 230 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 KAAG1Q9UBP8 84 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 EXTL2Q9UBQ6 330 aa9.27□□□□□ -0.93
HDLBP-242ENST00000488013 RFPL4AA6NLU0 287 aa9.26□□□□□ -0.93
HDLBP-242ENST00000488013 RFPL4AL1F8VTS6 287 aa9.26□□□□□ -0.93
HDLBP-242ENST00000488013 F8VVB4 439 aa9.26□□□□□ -0.93
HDLBP-242ENST00000488013 F8VWA3 439 aa9.26□□□□□ -0.93
HDLBP-242ENST00000488013 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.26□□□□□ -0.93
HDLBP-242ENST00000488013 SULT1C2O00338 296 aa9.26□□□□□ -0.93
HDLBP-242ENST00000488013 GEMIN2O14893 280 aaKnown RBP9.26□□□□□ -0.93
HDLBP-242ENST00000488013 PPIHO43447 177 aaKnown RBP9.26□□□□□ -0.93
HDLBP-242ENST00000488013 IGHV4-39P01824 125 aa9.26□□□□□ -0.93
HDLBP-242ENST00000488013 HEXAP06865 529 aa9.26□□□□□ -0.93
HDLBP-242ENST00000488013 PSG2P11465 335 aa9.26□□□□□ -0.93
HDLBP-242ENST00000488013 GABRR1P24046 479 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms