RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 TMEM176BQ3YBM2 270 aaPredicted RBP10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 ZNF66Q6ZN08 573 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 GBGT1Q8N5D6 347 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 ZNF321PQ8N8H1 164 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 MMABQ96EY8 250 aaPredicted RBP10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 MSL2Q9HCI7 577 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 ANAPC10Q9UM13 185 aa10.14□□□□□ -0.79
SEC61A1-205ENST00000483956 FREM3P0C091 2139 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 TRBV11-1A0A0K0K1C0 115 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 CEACAM18A8MTB9 384 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 PLPP3O14495 311 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 AQP7O14520 342 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 CD55P08174 381 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 CELA2BP08218 269 aaPredicted RBP10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 GP1BBP13224 206 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 PGCP20142 388 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 CTHP32929 405 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 ASCL1P50553 236 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 FZD2Q14332 565 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 COL5A1-AS1Q5SY13 56 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 SLC26A10Q8NG04 563 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 OR13H1Q8NG92 308 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 FGF14Q92915 247 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 ADIPOR1Q96A54 375 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 MRGPRX1Q96LB2 322 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 ZNF700Q9H0M5 742 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 B3GAT1Q9P2W7 334 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 TCFL5Q9UL49 500 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 COL5A1P20908 1838 aaPredicted RBP10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 ARID1BQ8NFD5 2236 aaPredicted RBP10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 ALG1L2C9J202 215 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 IGHEP01854 428 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 IGKV3-11P04433 115 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 UMODP07911 640 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 FOLR1P15328 257 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 NOVA1P51513 510 aaKnown RBP10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 TDRG1Q3Y452 100 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 PARM1Q6UWI2 310 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 SLC22A24Q8N4F4 322 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 ZFP62Q8NB50 900 aaPredicted RBP10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 OR2AJ1Q8NGZ0 328 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 TP53RKQ96S44 253 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 TBX15Q96SF7 602 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 PCED1AQ9H1Q7 454 aa10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 COA3Q9Y2R0 106 aaPredicted RBP10.13□□□□□ -0.79
SEC61A1-205ENST00000483956 A8MVM7 634 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 H0YIG0 161 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 XRCC2O43543 280 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 LMX1BO60663 402 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 IDH3GP51553 393 aaPredicted RBP10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 GNB2P62879 340 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 SQSTM1Q13501 440 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 PRSS8Q16651 343 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 C1orf140Q5VVS0 124 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 PTCRAQ6ISU1 281 aaPredicted RBP10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 P4HA3Q7Z4N8 544 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 SGPP2Q8IWX5 399 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 HAS2Q92819 552 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 BADQ92934 168 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 SDSLQ96GA7 329 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 MIEN1Q9BRT3 115 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 SRD5A3Q9H8P0 318 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 DNAH14Q0VDD8 3507 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 TMED7-TICAM2A0A0A6YYA0 188 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 A0A1B0GU03 582 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 ETV2O00321 342 aaPredicted RBP10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 JMJD7P0C870 316 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 VSIG8P0DPA2 414 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 BCKDHBP21953 392 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 TUBG1P23258 451 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 CCKARP32238 428 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 MARCH3Q86UD3 253 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 LYG1Q8N1E2 194 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 STT3BQ8TCJ2 826 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 TMEM37Q8WXS4 190 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 FAM221AA4D161 298 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 C10orf142B7Z368 130 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 MPZL1O95297 269 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 CYB5R3P00387 301 aaPredicted RBP10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 KNG1P01042 644 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 ZNF823P16415 610 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 OR10J1P30954 320 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 PDLIM4P50479 330 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 ZP2Q05996 745 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 VAX1Q5SQQ9 334 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 DNM1P34Q6PK57 102 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 IFI44Q8TCB0 444 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 RPP25Q9BUL9 199 aaKnown RBP10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 KIAA1456Q9P272 454 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 RNF150Q9ULK6 438 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 SLC5A6Q9Y289 635 aa10.12□□□□□ -0.79
SEC61A1-205ENST00000483956 TMEM14DPA8MWL7 114 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 B4DEV8 164 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 K7EP13 123 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 P2RY10O00398 339 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 TSPAN2O60636 221 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 WISP1O95388 367 aa10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 HSPB1P04792 205 aaKnown RBP10.11□□□□□ -0.79
SEC61A1-205ENST00000483956 FPR2P25090 351 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms