RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 HIST1H2BDP58876 126 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 HERV-K104P61576 105 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 HIST1H2BCP62807 126 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 DLK1P80370 383 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 HIST2H2BEQ16778 126 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 TMEM31Q5JXX7 168 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.46□□□□□ -0.41
NR1H3-220ENST00000481020 REC114Q7Z4M0 266 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 ZNF100Q8IYN0 542 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 C1orf87Q8N0U7 546 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 HIST3H2BBQ8N257 126 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 ZNF383Q8NA42 475 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 OR52M1Q8NGK5 317 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 LMX1AQ8TE12 382 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 Q8WTZ3 238 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 HIST1H2BHQ93079 126 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 TOMM40LQ969M1 308 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 HIST1H2BNQ99877 126 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 HIST1H2BMQ99879 126 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 CTDSP1Q9GZU7 261 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 PRDM13Q9H4Q3 707 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 KLRF1Q9NZS2 232 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 DKKL1Q9UK85 242 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 RNF150Q9ULK6 438 aa12.46□□□□□ -0.41
NR1H3-220ENST00000481020 OR5H15A6NDH6 313 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 FAM90A10PA6NDY2 464 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 FAM90A18PA6NE21 464 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 FAM90A16PA6NEW6 464 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 EPOPA6NHQ4 379 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 FAM90A20PA6NIJ5 464 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 FAM90A8PA6NJQ4 464 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 FAM90A7PA6NKC0 464 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 OR5H1A6NKK0 313 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 FAM90A22PA8MWA6 464 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 FAM90A12PA8MX19 464 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 FAM90A5PA8MXJ8 464 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 FAM90A23PA8MXZ1 464 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 XRCC2O43543 280 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 C1QL1O75973 258 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 DFFBO76075 338 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 FAM90A15PP0C7V4 464 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 FAM90A13PP0C7W8 464 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 FAM90A14PP0C7W9 464 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 FAM90A24PP0C7X0 464 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 PAX1P15863 534 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 RAB4BP61018 213 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 HLA-DRB3P79483 266 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 ICAM4Q14773 271 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 Q3ZCU0 254 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 WDR5BQ86VZ2 330 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 STX12Q86Y82 276 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 LIME1Q9H400 295 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 IGFLR1Q9H665 355 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 TRBV24-1A0A075B6N3 115 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 TRBV23-1A0A0A0MS06 115 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 C3orf85A0A1B0GTC6 90 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 M0R135 149 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 MPPED1O15442 326 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 PHF1O43189 567 aaPredicted RBP12.45□□□□□ -0.42
NR1H3-220ENST00000481020 PIAS2O75928 621 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 VAMP2P63027 116 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 FOXO1Q12778 655 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 IL24Q13007 206 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 PMS2P11Q13670 270 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 ENDOGQ14249 297 aaKnown RBP12.45□□□□□ -0.42
NR1H3-220ENST00000481020 SHBQ15464 509 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 TAF9Q16594 264 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 SP6Q3SY56 376 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 AKR1C8PQ5T2L2 129 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 TMEM252Q8N6L7 170 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 SLC35G3Q8N808 338 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 CLDND2Q8NHS1 167 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 ZNF799Q96GE5 643 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 LIN37Q96GY3 246 aaPredicted RBP12.45□□□□□ -0.42
NR1H3-220ENST00000481020 P2RX4Q99571 388 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 RARRES2Q99969 163 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 FAAP24Q9BTP7 215 aa12.45□□□□□ -0.42
NR1H3-220ENST00000481020 ATXN7L1Q9ULK2 861 aaPredicted RBP12.45□□□□□ -0.42
NR1H3-220ENST00000481020 CCDC187A0A096LP49 1063 aa12.44□□□□□ -0.42
NR1H3-220ENST00000481020 ARGFXA6NJG6 315 aa12.44□□□□□ -0.42
NR1H3-220ENST00000481020 CLDN34H7C241 214 aa12.44□□□□□ -0.42
NR1H3-220ENST00000481020 DUX1O43812 170 aa12.44□□□□□ -0.42
NR1H3-220ENST00000481020 RAMP1O60894 148 aa12.44□□□□□ -0.42
NR1H3-220ENST00000481020 CEACAM6P40199 344 aa12.44□□□□□ -0.42
NR1H3-220ENST00000481020 HNRNPKP61978 463 aaKnown RBP eCLIP12.44□□□□□ -0.42
NR1H3-220ENST00000481020 H3F3AP84243 136 aa12.44□□□□□ -0.42
NR1H3-220ENST00000481020 LANCL3Q6ZV70 420 aa12.44□□□□□ -0.42
NR1H3-220ENST00000481020 RABEPKQ7Z6M1 372 aa12.44□□□□□ -0.42
NR1H3-220ENST00000481020 ANKRD37Q7Z713 158 aa12.44□□□□□ -0.42
NR1H3-220ENST00000481020 H1FOOQ8IZA3 346 aaPredicted RBP12.44□□□□□ -0.42
NR1H3-220ENST00000481020 OR2M3Q8NG83 312 aa12.44□□□□□ -0.42
NR1H3-220ENST00000481020 RNASEH2CQ8TDP1 164 aaKnown RBP12.44□□□□□ -0.42
NR1H3-220ENST00000481020 PCED1AQ9H1Q7 454 aa12.44□□□□□ -0.42
NR1H3-220ENST00000481020 PITPNC1Q9UKF7 332 aa12.44□□□□□ -0.42
NR1H3-220ENST00000481020 NXT1Q9UKK6 140 aaKnown RBP12.44□□□□□ -0.42
NR1H3-220ENST00000481020 CYP8B1Q9UNU6 501 aa12.44□□□□□ -0.42
NR1H3-220ENST00000481020 ATG2AQ2TAZ0 1938 aa12.43□□□□□ -0.42
NR1H3-220ENST00000481020 ADAMTS9Q9P2N4 1935 aa12.43□□□□□ -0.42
NR1H3-220ENST00000481020 MKRN2OSH3BPM6 223 aa12.43□□□□□ -0.42
NR1H3-220ENST00000481020 MSTNO14793 375 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms