RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 CD300LBA8K4G0 201 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 ZNF732B4DXR9 585 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 H0YIZ8 118 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 BCL2L11O43521 198 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 ZNF250P15622 560 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 FUT3P21217 361 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 RGS7BPQ6MZT1 257 aaPredicted RBP11.17□□□□□ -0.62
SEC13-216ENST00000479868 DHRS11Q6UWP2 260 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 GCNT2Q8N0V5 402 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 OR5M9Q8NGP3 310 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 GMPPAQ96IJ6 420 aaPredicted RBP11.17□□□□□ -0.62
SEC13-216ENST00000479868 RNF126Q9BV68 326 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 C1QTNF6Q9BXI9 259 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 ZNF442Q9H7R0 627 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 MTCH1Q9NZJ7 389 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 IL36RNQ9UBH0 155 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 ZNF175Q9Y473 711 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 CTSDP07339 412 aaPredicted RBP11.17□□□□□ -0.62
SEC13-216ENST00000479868 ECI1P42126 302 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 LUMP51884 338 aaPredicted RBP11.17□□□□□ -0.62
SEC13-216ENST00000479868 CYCSP99999 105 aaKnown RBP11.17□□□□□ -0.62
SEC13-216ENST00000479868 MYPOPQ86VE0 399 aaPredicted RBP11.17□□□□□ -0.62
SEC13-216ENST00000479868 SLC30A7Q8NEW0 376 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 TOMM40LQ969M1 308 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 METTL8Q9H825 291 aaKnown RBP11.17□□□□□ -0.62
SEC13-216ENST00000479868 GP6Q9HCN6 339 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 C12orf4Q9NQ89 552 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 BOD1L1Q8NFC6 3051 aa11.17□□□□□ -0.62
SEC13-216ENST00000479868 RIF1Q5UIP0 2472 aaKnown RBP11.16□□□□□ -0.62
SEC13-216ENST00000479868 DSPP15924 2871 aaKnown RBP11.16□□□□□ -0.62
SEC13-216ENST00000479868 A0A1W2PR80 420 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 IFNA2P01563 188 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 IGHG3P01860 377 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 PDGFAP04085 211 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 HOXB5P09067 269 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 UBA52P62987 128 aaKnown RBP11.16□□□□□ -0.62
SEC13-216ENST00000479868 P4HA3Q7Z4N8 544 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 INO80EQ8NBZ0 244 aaPredicted RBP11.16□□□□□ -0.62
SEC13-216ENST00000479868 RELL2Q8NC24 303 aaPredicted RBP11.16□□□□□ -0.62
SEC13-216ENST00000479868 REG4Q9BYZ8 158 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 CLCF1Q9UBD9 225 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 TRBV6-7A0A0A0MS04 114 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 hCG_1807616A0A1W2PRN6 198 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 SYNGR1O43759 233 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 LRP3O75074 770 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 CELA3BP08861 270 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 FGF12P61328 243 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 CTAG1AP78358 180 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 SPATA46Q5T0L3 261 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 ELP2Q6IA86 826 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 IGFL2Q6UWQ7 119 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 ANGPTL6Q8NI99 470 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 NANOS1Q8WY41 292 aaKnown RBP11.16□□□□□ -0.62
SEC13-216ENST00000479868 OR5P3Q8WZ94 311 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 DCUN1D4Q92564 292 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 RRNAD1Q96FB5 475 aaKnown RBP11.16□□□□□ -0.62
SEC13-216ENST00000479868 ZNF471Q9BX82 626 aaPredicted RBP11.16□□□□□ -0.62
SEC13-216ENST00000479868 ZNF286AQ9HBT8 521 aa11.16□□□□□ -0.62
SEC13-216ENST00000479868 CRYM-AS1A6NIL9 109 aa11.15□□□□□ -0.62
SEC13-216ENST00000479868 TEX46H3BTG2 121 aa11.15□□□□□ -0.62
SEC13-216ENST00000479868 FCGR2CP31995 323 aa11.15□□□□□ -0.62
SEC13-216ENST00000479868 FXYD4P59646 89 aa11.15□□□□□ -0.62
SEC13-216ENST00000479868 FAM74A1Q5RGS3 127 aa11.15□□□□□ -0.62
SEC13-216ENST00000479868 TMEM211Q6ICI0 200 aa11.15□□□□□ -0.62
SEC13-216ENST00000479868 OR2T2Q6IF00 324 aa11.15□□□□□ -0.62
SEC13-216ENST00000479868 TFAP2EQ6VUC0 442 aa11.15□□□□□ -0.62
SEC13-216ENST00000479868 DPPA2Q7Z7J5 298 aa11.15□□□□□ -0.62
SEC13-216ENST00000479868 TMEM200AQ86VY9 491 aa11.15□□□□□ -0.62
SEC13-216ENST00000479868 SAXO1Q8IYX7 474 aa11.15□□□□□ -0.62
SEC13-216ENST00000479868 OR5A2Q8NGI9 324 aa11.15□□□□□ -0.62
SEC13-216ENST00000479868 OR1S1Q8NH92 325 aa11.15□□□□□ -0.62
SEC13-216ENST00000479868 RBPMSQ93062 196 aaKnown RBP11.15□□□□□ -0.62
SEC13-216ENST00000479868 MARVELD3Q96A59 401 aa11.15□□□□□ -0.62
SEC13-216ENST00000479868 TRIB1Q96RU8 372 aa11.15□□□□□ -0.62
SEC13-216ENST00000479868 OPA3Q9H6K4 179 aa11.15□□□□□ -0.62
SEC13-216ENST00000479868 TEX13DA0A0J9YY54 714 aaPredicted RBP11.14□□□□□ -0.63
SEC13-216ENST00000479868 C3orf80F5H4A9 247 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 ZNF728P0DKX0 622 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 IGHV1-2P23083 117 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 IL32P24001 234 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 RBMXP38159 391 aaKnown RBP11.14□□□□□ -0.63
SEC13-216ENST00000479868 PIGPP57054 158 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 IGFBP7Q16270 282 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 CCDC28AQ8IWP9 274 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 SGPP2Q8IWX5 399 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 POC1AQ8NBT0 407 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 EXTL1Q92935 676 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 FAM86C1Q9NVL1 165 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 C1orf123Q9NWV4 160 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 SDHAF2Q9NX18 166 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 OR5AC2Q9NZP5 309 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 FAM90A10PA6NDY2 464 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 FAM90A18PA6NE21 464 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 FAM90A16PA6NEW6 464 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 MFSD2BA6NFX1 497 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 FAM90A20PA6NIJ5 464 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 FAM90A8PA6NJQ4 464 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 FAM90A7PA6NKC0 464 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 ANKRD30BLA7E2S9 258 aa11.14□□□□□ -0.63
SEC13-216ENST00000479868 FAM90A22PA8MWA6 464 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms