RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 DRC3Q9H069 523 aa2.43□□□□□ -2.02
SMNDC1-205ENST00000477763 IMP3Q9NV31 184 aaKnown RBP2.43□□□□□ -2.02
SMNDC1-205ENST00000477763 PRELID1Q9Y255 219 aa2.43□□□□□ -2.02
SMNDC1-205ENST00000477763 PLB1Q6P1J6 1458 aa2.43□□□□□ -2.02
SMNDC1-205ENST00000477763 RAD50Q92878 1312 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 TMEM72A0PK05 275 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 OR6C70A6NIJ9 312 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 VGLL3A8MV65 326 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 LIN7AO14910 233 aaPredicted RBP2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 TOX3O15405 576 aaPredicted RBP2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 NDUFS5O43920 106 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 IGLV7-43P04211 117 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 SERPINA6P08185 405 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 SYT1P21579 422 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 KDELR2P33947 212 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 MAGOHP61326 146 aaKnown RBP2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 RPL31P62899 125 aaKnown RBP2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 ELF3P78545 371 aaPredicted RBP2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 LAMTOR4Q0VGL1 99 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 OR4D1Q15615 310 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 TTC32Q5I0X7 151 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 FAM27D1Q5T7N8 215 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 PAGE2Q7Z2X7 111 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 CRLF3Q8IUI8 442 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 LRRC34Q8IZ02 419 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 ZNF680Q8NEM1 530 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 OR1P1Q8NH06 330 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 ORAOV1Q8WV07 137 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 C9orf16Q9BUW7 83 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 DERL2Q9GZP9 239 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 WDR54Q9H977 334 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 DHCR7Q9UBM7 475 aaKnown RBP2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 CLEC2DQ9UHP7 191 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 NXT1Q9UKK6 140 aaKnown RBP2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 RAB23Q9ULC3 237 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 SLC7A11Q9UPY5 501 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 V9GYY9 64 aa2.42□□□□□ -2.02
SMNDC1-205ENST00000477763 DOCK8Q8NF50 2099 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 ANKRD20A5PA0PJZ0 165 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 GOLGA8IPA6NC78 632 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 SEC14L6B5MCN3 397 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 CLDN34H7C241 214 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 CNMDO75829 334 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 SC5DO75845 299 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 RPP14O95059 124 aaKnown RBP2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 LDOC1O95751 146 aaPredicted RBP2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 RHOCP08134 193 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 OR4Q2P0C623 313 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 SLC35E2BP0CK96 405 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 HLA-GP17693 338 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 HLA-DMAP28067 261 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 MAGEA2P43356 314 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 DNASE1L1P49184 302 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 TGM4P49221 684 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 MLF1P58340 268 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 VBP1P61758 197 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 SARNPP82979 210 aaKnown RBP2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 IFFO1Q0D2I5 559 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 MED21Q13503 144 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 ZBTB6Q15916 424 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 UAP1Q16222 522 aaPredicted RBP2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 IGFBP7Q16270 282 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 EXOC3L4Q17RC7 722 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 GOLGA7BQ2TAP0 167 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 SP6Q3SY56 376 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 CDNFQ49AH0 187 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 TMEM31Q5JXX7 168 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 APOBEC3HQ6NTF7 200 aaKnown RBP2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 FAM173BQ6P4H8 233 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 CLEC18BQ6UXF7 455 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 PDPNQ86YL7 162 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 SGPP2Q8IWX5 399 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 ZCCHC24Q8N2G6 241 aaKnown RBP2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 CDRT4Q8N9R6 151 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 OR2M7Q8NG81 312 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 OR6K2Q8NGY2 324 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 PHF10Q8WUB8 498 aaKnown RBP2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 YIPF6Q96EC8 236 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 TMED9Q9BVK6 235 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 METTL8Q9H825 291 aaKnown RBP2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 LINC00574Q9H8X3 128 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 RMND1Q9NWS8 449 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 USE1Q9NZ43 259 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 TFR2Q9UP52 801 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 SCN1AP35498 2009 aa2.41□□□□□ -2.02
SMNDC1-205ENST00000477763 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.4□□□□□ -2.02
SMNDC1-205ENST00000477763 MAP3K5Q99683 1374 aa2.4□□□□□ -2.02
SMNDC1-205ENST00000477763 IGKV1-6A0A0C4DH72 117 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 FAM240AA0A1B0GVK7 77 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 GOLGA6L10A6NI86 522 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 SMIM23A6NLE4 172 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 SMLR1H3BR10 107 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 IGKV1-39P01597 117 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 IGKV1D-39P04432 117 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 PSKH1P11801 424 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 CDKN2CP42773 168 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 RGS6P49758 472 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 NUDT2P50583 147 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 DSTNP60981 165 aa2.4□□□□□ -2.03
SMNDC1-205ENST00000477763 RPS11P62280 158 aaKnown RBP eCLIP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms