RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 COX7A1P24310 79 aa17.72■□□□□ 0.43
LIME1-203ENST00000465591 BMXP51813 675 aa17.72■□□□□ 0.43
LIME1-203ENST00000465591 GTF2A1P52655 376 aaPredicted RBP17.72■□□□□ 0.43
LIME1-203ENST00000465591 SNU13P55769 128 aaKnown RBP17.72■□□□□ 0.43
LIME1-203ENST00000465591 KRTAP10-3P60369 221 aa17.72■□□□□ 0.43
LIME1-203ENST00000465591 RPL15P61313 204 aaKnown RBP17.72■□□□□ 0.43
LIME1-203ENST00000465591 PDZK1IP1Q13113 114 aa17.72■□□□□ 0.43
LIME1-203ENST00000465591 OLFML2AQ68BL7 652 aa17.72■□□□□ 0.43
LIME1-203ENST00000465591 LHFPL2Q6ZUX7 228 aa17.72■□□□□ 0.43
LIME1-203ENST00000465591 OR8H2Q8N162 312 aa17.72■□□□□ 0.43
LIME1-203ENST00000465591 FAM58AQ8N1B3 248 aa17.72■□□□□ 0.43
LIME1-203ENST00000465591 BEND2Q8NDZ0 799 aa17.72■□□□□ 0.43
LIME1-203ENST00000465591 SPSB1Q96BD6 273 aa17.72■□□□□ 0.43
LIME1-203ENST00000465591 MRPL48Q96GC5 212 aaKnown RBP17.72■□□□□ 0.43
LIME1-203ENST00000465591 VCXQ9H320 206 aa17.72■□□□□ 0.43
LIME1-203ENST00000465591 INPP5EQ9NRR6 644 aa17.72■□□□□ 0.43
LIME1-203ENST00000465591 VPREB3Q9UKI3 123 aa17.72■□□□□ 0.43
LIME1-203ENST00000465591 CLPSL1A2RUU4 121 aa17.71■□□□□ 0.43
LIME1-203ENST00000465591 C17orf98A8MV24 154 aa17.71■□□□□ 0.43
LIME1-203ENST00000465591 PSPNO60542 156 aa17.71■□□□□ 0.43
LIME1-203ENST00000465591 PEX2P28328 305 aa17.71■□□□□ 0.43
LIME1-203ENST00000465591 EDDM3BP56851 147 aa17.71■□□□□ 0.43
LIME1-203ENST00000465591 MIDNQ504T8 468 aa17.71■□□□□ 0.43
LIME1-203ENST00000465591 PRR31Q5SQ13 230 aa17.71■□□□□ 0.43
LIME1-203ENST00000465591 OGFRL1Q5TC84 451 aaPredicted RBP17.71■□□□□ 0.43
LIME1-203ENST00000465591 XAF1Q6GPH4 301 aa17.71■□□□□ 0.43
LIME1-203ENST00000465591 Q6ZSV7 163 aa17.71■□□□□ 0.43
LIME1-203ENST00000465591 TPRX1Q8N7U7 411 aa17.71■□□□□ 0.43
LIME1-203ENST00000465591 OR5D18Q8NGL1 313 aa17.71■□□□□ 0.43
LIME1-203ENST00000465591 LINC01006Q8NI28 216 aa17.71■□□□□ 0.43
LIME1-203ENST00000465591 CNIH3Q8TBE1 160 aa17.71■□□□□ 0.43
LIME1-203ENST00000465591 SNX22Q96L94 193 aa17.71■□□□□ 0.43
LIME1-203ENST00000465591 CHST6Q9GZX3 395 aa17.71■□□□□ 0.43
LIME1-203ENST00000465591 FGF20Q9NP95 211 aaPredicted RBP17.71■□□□□ 0.43
LIME1-203ENST00000465591 NKX1-2Q9UD57 310 aaPredicted RBP17.71■□□□□ 0.43
LIME1-203ENST00000465591 A0A1B0GUS0 222 aa17.7■□□□□ 0.42
LIME1-203ENST00000465591 A0A1W2PPH5 198 aa17.7■□□□□ 0.42
LIME1-203ENST00000465591 MT-ND2P03891 347 aa17.7■□□□□ 0.42
LIME1-203ENST00000465591 PRKACAP17612 351 aa17.7■□□□□ 0.42
LIME1-203ENST00000465591 RIPK1Q13546 671 aa17.7■□□□□ 0.42
LIME1-203ENST00000465591 EDDM3AQ14507 147 aa17.7■□□□□ 0.42
LIME1-203ENST00000465591 ZNF691Q5VV52 312 aa17.7■□□□□ 0.42
LIME1-203ENST00000465591 GDPGP1Q6ZNW5 385 aa17.7■□□□□ 0.42
LIME1-203ENST00000465591 GDPD3Q7L5L3 318 aa17.7■□□□□ 0.42
LIME1-203ENST00000465591 Q8IYB0 196 aa17.7■□□□□ 0.42
LIME1-203ENST00000465591 ZNF555Q8NEP9 628 aa17.7■□□□□ 0.42
LIME1-203ENST00000465591 OR4S1Q8NGB4 309 aa17.7■□□□□ 0.42
LIME1-203ENST00000465591 RGP1Q92546 391 aaPredicted RBP17.7■□□□□ 0.42
LIME1-203ENST00000465591 ZCCHC4Q9H5U6 513 aa17.7■□□□□ 0.42
LIME1-203ENST00000465591 ZNF696Q9H7X3 374 aa17.7■□□□□ 0.42
LIME1-203ENST00000465591 HEXA-AS1Q9H8Q6 139 aa17.7■□□□□ 0.42
LIME1-203ENST00000465591 SEBOXQ9HB31 216 aaPredicted RBP17.7■□□□□ 0.42
LIME1-203ENST00000465591 H3BUX3 64 aa17.69■□□□□ 0.42
LIME1-203ENST00000465591 ETV1P50549 477 aa17.69■□□□□ 0.42
LIME1-203ENST00000465591 ZNF146Q15072 292 aa17.69■□□□□ 0.42
LIME1-203ENST00000465591 KLHL22Q53GT1 634 aa17.69■□□□□ 0.42
LIME1-203ENST00000465591 ASPHD2Q6ICH7 369 aa17.69■□□□□ 0.42
LIME1-203ENST00000465591 LHFPL4Q7Z7J7 247 aa17.69■□□□□ 0.42
LIME1-203ENST00000465591 ZSCAN4Q8NAM6 433 aaPredicted RBP17.69■□□□□ 0.42
LIME1-203ENST00000465591 OR5AK2Q8NH90 309 aa17.69■□□□□ 0.42
LIME1-203ENST00000465591 JAM3Q9BX67 310 aa17.69■□□□□ 0.42
LIME1-203ENST00000465591 HMG20AQ9NP66 347 aa17.69■□□□□ 0.42
LIME1-203ENST00000465591 CMYA5Q8N3K9 4069 aa17.69■□□□□ 0.42
LIME1-203ENST00000465591 BTBD17A6NE02 478 aa17.68■□□□□ 0.42
LIME1-203ENST00000465591 TMEM212A6NML5 194 aa17.68■□□□□ 0.42
LIME1-203ENST00000465591 KDM4BO94953 1096 aa17.68■□□□□ 0.42
LIME1-203ENST00000465591 CYB5AP00167 134 aa17.68■□□□□ 0.42
LIME1-203ENST00000465591 ZNF728P0DKX0 622 aa17.68■□□□□ 0.42
LIME1-203ENST00000465591 GABRR1P24046 479 aa17.68■□□□□ 0.42
LIME1-203ENST00000465591 OR3A1P47881 315 aa17.68■□□□□ 0.42
LIME1-203ENST00000465591 GBX2P52951 348 aaPredicted RBP17.68■□□□□ 0.42
LIME1-203ENST00000465591 GRK1Q15835 563 aa17.68■□□□□ 0.42
LIME1-203ENST00000465591 LDLRAD2Q5SZI1 272 aa17.68■□□□□ 0.42
LIME1-203ENST00000465591 OR2G6Q5TZ20 316 aa17.68■□□□□ 0.42
LIME1-203ENST00000465591 PARP16Q8N5Y8 322 aa17.68■□□□□ 0.42
LIME1-203ENST00000465591 CYGBQ8WWM9 190 aa17.68■□□□□ 0.42
LIME1-203ENST00000465591 SSX3Q99909 188 aa17.68■□□□□ 0.42
LIME1-203ENST00000465591 MEGF9Q9H1U4 602 aa17.68■□□□□ 0.42
LIME1-203ENST00000465591 GSTK1Q9Y2Q3 226 aa17.68■□□□□ 0.42
LIME1-203ENST00000465591 RNF114Q9Y508 228 aa17.68■□□□□ 0.42
LIME1-203ENST00000465591 MEGF11A6BM72 1044 aa17.67■□□□□ 0.42
LIME1-203ENST00000465591 SIRPB1O00241 398 aa17.67■□□□□ 0.42
LIME1-203ENST00000465591 CCDC159P0C7I6 412 aa17.67■□□□□ 0.42
LIME1-203ENST00000465591 OCM2P0CE71 109 aa17.67■□□□□ 0.42
LIME1-203ENST00000465591 OCMP0CE72 109 aaPredicted RBP17.67■□□□□ 0.42
LIME1-203ENST00000465591 PROK1P58294 105 aa17.67■□□□□ 0.42
LIME1-203ENST00000465591 ZP1P60852 638 aa17.67■□□□□ 0.42
LIME1-203ENST00000465591 MRPL28Q13084 256 aaKnown RBP17.67■□□□□ 0.42
LIME1-203ENST00000465591 IL18R1Q13478 541 aa17.67■□□□□ 0.42
LIME1-203ENST00000465591 LY6EQ16553 131 aa17.67■□□□□ 0.42
LIME1-203ENST00000465591 DHRS7BQ6IAN0 325 aaPredicted RBP17.67■□□□□ 0.42
LIME1-203ENST00000465591 DYNAPQ8N1N2 210 aa17.67■□□□□ 0.42
LIME1-203ENST00000465591 OR5R1Q8NH85 324 aa17.67■□□□□ 0.42
LIME1-203ENST00000465591 MYCBPQ99417 103 aaPredicted RBP17.67■□□□□ 0.42
LIME1-203ENST00000465591 COMMD4Q9H0A8 199 aa17.67■□□□□ 0.42
LIME1-203ENST00000465591 VCX3BQ9H321 246 aa17.67■□□□□ 0.42
LIME1-203ENST00000465591 RRP15Q9Y3B9 282 aaKnown RBP17.67■□□□□ 0.42
LIME1-203ENST00000465591 SIRT4Q9Y6E7 314 aaPredicted RBP17.67■□□□□ 0.42
LIME1-203ENST00000465591 hCG_1809904A0A1W2PP81 198 aa17.66■□□□□ 0.42
LIME1-203ENST00000465591 A0A1W2PPE2 198 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms