RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 FSTL3O95633 263 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 HAND1O96004 215 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 PAHP00439 452 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 ZNF44P15621 663 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 RPS2P15880 293 aaKnown RBP8.5□□□□□ -1.05
UPF2-204ENST00000460569 DUSP1P28562 367 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 SOX6P35712 828 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 RORCP51449 518 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 SCN1BQ07699 218 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 IKZF1Q13422 519 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 UNC119Q13432 240 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 IL13RA2Q14627 380 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 C2orf76Q3KRA6 126 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 FOXB2Q5VYV0 432 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 LYPD2Q6UXB3 125 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 SLC36A1Q7Z2H8 476 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 CD177Q8N6Q3 437 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 Q8NFD4 153 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 OR51T1Q8NGJ9 327 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 CLDND2Q8NHS1 167 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 ANGPTL6Q8NI99 470 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 DYNC2LI1Q8TCX1 351 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 MRPS24Q96EL2 167 aaKnown RBP8.5□□□□□ -1.05
UPF2-204ENST00000460569 CCL13Q99616 98 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 BARHL1Q9BZE3 327 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 ZNF665Q9H7R5 613 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 OR5V1Q9UGF6 321 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 ZNF222Q9UK12 451 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 MYO9AB2RTY4 2548 aa8.5□□□□□ -1.05
UPF2-204ENST00000460569 CR1P17927 2039 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 A0A1B0GW55 424 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 CYSRT1A8MQ03 144 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 RNF223E7ERA6 249 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 SIRPB1O00241 398 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 SH2D1BO14796 132 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 GEMIN2O14893 280 aaKnown RBP8.49□□□□□ -1.05
UPF2-204ENST00000460569 TMPRSS2O15393 492 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 NDUFA2O43678 99 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 TMEM127O75204 238 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 OR7C1O76099 320 aaPredicted RBP8.49□□□□□ -1.05
UPF2-204ENST00000460569 IGHV2-5P01817 119 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 DUX4L2P0CJ85 424 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 DUX4L3P0CJ86 424 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 DUX4L4P0CJ87 422 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 DUX4L5P0CJ88 424 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 DUX4L6P0CJ89 424 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 DUX4L7P0CJ90 424 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 ZNF182P17025 639 aaPredicted RBP8.49□□□□□ -1.05
UPF2-204ENST00000460569 USF1P22415 310 aaPredicted RBP8.49□□□□□ -1.05
UPF2-204ENST00000460569 GABRR1P24046 479 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 PRDX2P32119 198 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 RPS27AP62979 156 aaKnown RBP8.49□□□□□ -1.05
UPF2-204ENST00000460569 IL13RA1P78552 427 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 QRFPP83859 136 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 PLA2G7Q13093 441 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 ZNF146Q15072 292 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 PDCD1Q15116 288 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 TAF9Q16594 264 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 NHLRC3Q5JS37 347 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 DUX4L9Q6RFH8 374 aaPredicted RBP8.49□□□□□ -1.05
UPF2-204ENST00000460569 ZNF788Q6ZQV5 615 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 NLRC3Q7RTR2 1065 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 LINC00596Q86U02 117 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 FAM216BQ8N7L0 139 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 ASCC1Q8N9N2 400 aaKnown RBP8.49□□□□□ -1.05
UPF2-204ENST00000460569 TMEM185AQ8NFB2 350 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 OR8B3Q8NGG8 313 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 AP3S1Q92572 193 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 RAB39BQ96DA2 213 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 DGCR14Q96DF8 476 aaKnown RBP8.49□□□□□ -1.05
UPF2-204ENST00000460569 NEIL1Q96FI4 390 aaPredicted RBP8.49□□□□□ -1.05
UPF2-204ENST00000460569 Q96M66 194 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 GAFA1Q96PS6 74 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 OR8B2Q96RD0 313 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 DCUN1D5Q9BTE7 237 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 URM1Q9BTM9 101 aaKnown RBP8.49□□□□□ -1.05
UPF2-204ENST00000460569 MRI1Q9BV20 369 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 REG4Q9BYZ8 158 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 DNTTIP1Q9H147 329 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 PATZ1Q9HBE1 687 aaKnown RBP8.49□□□□□ -1.05
UPF2-204ENST00000460569 BATF3Q9NR55 127 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 CCDC59Q9P031 241 aaKnown RBP8.49□□□□□ -1.05
UPF2-204ENST00000460569 ABRACLQ9P1F3 81 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 CTSZQ9UBR2 303 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 DUX4Q9UBX2 424 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 FBLN5Q9UBX5 448 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 MIOXQ9UGB7 285 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 METRNQ9UJH8 293 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 ETV7Q9Y603 341 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 ITPR3Q14573 2671 aa8.49□□□□□ -1.05
UPF2-204ENST00000460569 CSMD1Q96PZ7 3565 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 ABCA2Q9BZC7 2435 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 A6NHS1 94 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 F5H0A9 414 aaPredicted RBP8.48□□□□□ -1.05
UPF2-204ENST00000460569 HSPB6O14558 160 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 DEGS1O15121 323 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 LDLRAD4O15165 306 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 SIGLEC5O15389 551 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 OR2H2O95918 312 aa8.48□□□□□ -1.05
UPF2-204ENST00000460569 HEXAP06865 529 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms