RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 ZNF782Q6ZMW2 699 aaPredicted RBP15.39■□□□□ 0.05
COL5A1-203ENST00000460264 Q6ZSV7 163 aa15.39■□□□□ 0.05
COL5A1-203ENST00000460264 TCF23Q7RTU1 214 aa15.39■□□□□ 0.05
COL5A1-203ENST00000460264 OR13C9Q8NGT0 318 aa15.39■□□□□ 0.05
COL5A1-203ENST00000460264 STMN2Q93045 179 aa15.39■□□□□ 0.05
COL5A1-203ENST00000460264 RFT1Q96AA3 541 aa15.39■□□□□ 0.05
COL5A1-203ENST00000460264 SNX22Q96L94 193 aa15.39■□□□□ 0.05
COL5A1-203ENST00000460264 RDH12Q96NR8 316 aa15.39■□□□□ 0.05
COL5A1-203ENST00000460264 RPL36Q9Y3U8 105 aaKnown RBP15.39■□□□□ 0.05
COL5A1-203ENST00000460264 RNF114Q9Y508 228 aa15.39■□□□□ 0.05
COL5A1-203ENST00000460264 MEX3AA1L020 520 aaKnown RBP15.38■□□□□ 0.05
COL5A1-203ENST00000460264 TMEM212A6NML5 194 aa15.38■□□□□ 0.05
COL5A1-203ENST00000460264 E9PI62 339 aa15.38■□□□□ 0.05
COL5A1-203ENST00000460264 RBP4P02753 201 aa15.38■□□□□ 0.05
COL5A1-203ENST00000460264 OCM2P0CE71 109 aa15.38■□□□□ 0.05
COL5A1-203ENST00000460264 OCMP0CE72 109 aaPredicted RBP15.38■□□□□ 0.05
COL5A1-203ENST00000460264 ZNF728P0DKX0 622 aa15.38■□□□□ 0.05
COL5A1-203ENST00000460264 DUSP1P28562 367 aa15.38■□□□□ 0.05
COL5A1-203ENST00000460264 MRPL28Q13084 256 aaKnown RBP15.38■□□□□ 0.05
COL5A1-203ENST00000460264 EDDM3AQ14507 147 aa15.38■□□□□ 0.05
COL5A1-203ENST00000460264 ZNF146Q15072 292 aa15.38■□□□□ 0.05
COL5A1-203ENST00000460264 SPIN3Q5JUX0 258 aa15.38■□□□□ 0.05
COL5A1-203ENST00000460264 RNF144BQ7Z419 303 aa15.38■□□□□ 0.05
COL5A1-203ENST00000460264 OR52N4Q8NGI2 321 aa15.38■□□□□ 0.05
COL5A1-203ENST00000460264 SPACA5Q96QH8 159 aa15.38■□□□□ 0.05
COL5A1-203ENST00000460264 SSX3Q99909 188 aa15.38■□□□□ 0.05
COL5A1-203ENST00000460264 CITED1Q99966 193 aa15.38■□□□□ 0.05
COL5A1-203ENST00000460264 VWFP04275 2813 aa15.38■□□□□ 0.05
COL5A1-203ENST00000460264 IGKV1-12A0A0C4DH73 117 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 PSPNO60542 156 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 WBP4O75554 376 aaKnown RBP15.37■□□□□ 0.05
COL5A1-203ENST00000460264 IGKV1D-12P01611 117 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 LIMS3P0CW19 117 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 LIMS4P0CW20 117 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 CALCBP10092 127 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 PRKACAP17612 351 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 GABRR1P24046 479 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 PAX6P26367 422 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 TGFBR2P37173 567 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 SNU13P55769 128 aaKnown RBP15.37■□□□□ 0.05
COL5A1-203ENST00000460264 PROK1P58294 105 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 MEF2CQ06413 473 aaPredicted RBP15.37■□□□□ 0.05
COL5A1-203ENST00000460264 SMN1Q16637 294 aaKnown RBP15.37■□□□□ 0.05
COL5A1-203ENST00000460264 LRRC75BQ2VPJ9 315 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 KLHL22Q53GT1 634 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 BRICD5Q6PL45 260 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 CRIP3Q6Q6R5 217 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 ZNF555Q8NEP9 628 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 OR5D18Q8NGL1 313 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 PDCD1LG2Q9BQ51 273 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 JAM3Q9BX67 310 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 CHST6Q9GZX3 395 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 MEGF9Q9H1U4 602 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 ZCCHC4Q9H5U6 513 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 C16orf95Q9H693 158 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 HMG20AQ9NP66 347 aa15.37■□□□□ 0.05
COL5A1-203ENST00000460264 TSPAN9O75954 239 aa15.36■□□□□ 0.05
COL5A1-203ENST00000460264 CLPXO76031 633 aa15.36■□□□□ 0.05
COL5A1-203ENST00000460264 KDM4BO94953 1096 aa15.36■□□□□ 0.05
COL5A1-203ENST00000460264 RPSAP08865 295 aaKnown RBP15.36■□□□□ 0.05
COL5A1-203ENST00000460264 CCDC159P0C7I6 412 aa15.36■□□□□ 0.05
COL5A1-203ENST00000460264 PEX2P28328 305 aa15.36■□□□□ 0.05
COL5A1-203ENST00000460264 GBX2P52951 348 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-203ENST00000460264 KRTAP10-3P60369 221 aa15.36■□□□□ 0.05
COL5A1-203ENST00000460264 GRK1Q15835 563 aa15.36■□□□□ 0.05
COL5A1-203ENST00000460264 AANATQ16613 207 aa15.36■□□□□ 0.05
COL5A1-203ENST00000460264 LPCAT4Q643R3 524 aa15.36■□□□□ 0.05
COL5A1-203ENST00000460264 PARP16Q8N5Y8 322 aa15.36■□□□□ 0.05
COL5A1-203ENST00000460264 OR4S1Q8NGB4 309 aa15.36■□□□□ 0.05
COL5A1-203ENST00000460264 OR5AK2Q8NH90 309 aa15.36■□□□□ 0.05
COL5A1-203ENST00000460264 ZNF714Q96N38 554 aa15.36■□□□□ 0.05
COL5A1-203ENST00000460264 COMMD4Q9H0A8 199 aa15.36■□□□□ 0.05
COL5A1-203ENST00000460264 PPA2Q9H2U2 334 aa15.36■□□□□ 0.05
COL5A1-203ENST00000460264 FGF20Q9NP95 211 aaPredicted RBP15.36■□□□□ 0.05
COL5A1-203ENST00000460264 LINC00312Q9Y6C7 94 aa15.36■□□□□ 0.05
COL5A1-203ENST00000460264 ODF3BA8MYP8 253 aa15.35■□□□□ 0.05
COL5A1-203ENST00000460264 IGHV1-8P0DP01 117 aa15.35■□□□□ 0.05
COL5A1-203ENST00000460264 OR3A1P47881 315 aa15.35■□□□□ 0.05
COL5A1-203ENST00000460264 LGALS4P56470 323 aa15.35■□□□□ 0.05
COL5A1-203ENST00000460264 TREML4Q6UXN2 200 aa15.35■□□□□ 0.05
COL5A1-203ENST00000460264 LHFPL4Q7Z7J7 247 aa15.35■□□□□ 0.05
COL5A1-203ENST00000460264 SAXO1Q8IYX7 474 aa15.35■□□□□ 0.05
COL5A1-203ENST00000460264 TPRX1Q8N7U7 411 aa15.35■□□□□ 0.05
COL5A1-203ENST00000460264 HAVCR2Q8TDQ0 301 aa15.35■□□□□ 0.05
COL5A1-203ENST00000460264 TSEN15Q8WW01 171 aaKnown RBP15.35■□□□□ 0.05
COL5A1-203ENST00000460264 NEK6Q9HC98 313 aa15.35■□□□□ 0.05
COL5A1-203ENST00000460264 GLS2Q9UI32 602 aa15.35■□□□□ 0.05
COL5A1-203ENST00000460264 GSTK1Q9Y2Q3 226 aa15.35■□□□□ 0.05
COL5A1-203ENST00000460264 hADV38S2A0JD32 116 aa15.34■□□□□ 0.05
COL5A1-203ENST00000460264 FAM90A8PA6NJQ4 464 aa15.34■□□□□ 0.05
COL5A1-203ENST00000460264 SIRPB1O00241 398 aa15.34■□□□□ 0.05
COL5A1-203ENST00000460264 MGST3O14880 152 aa15.34■□□□□ 0.05
COL5A1-203ENST00000460264 SULT1B1O43704 296 aa15.34■□□□□ 0.05
COL5A1-203ENST00000460264 ALX3O95076 343 aa15.34■□□□□ 0.05
COL5A1-203ENST00000460264 CLIC3O95833 236 aa15.34■□□□□ 0.05
COL5A1-203ENST00000460264 HCKP08631 526 aa15.34■□□□□ 0.05
COL5A1-203ENST00000460264 LY6EQ16553 131 aa15.34■□□□□ 0.05
COL5A1-203ENST00000460264 LRRC36Q1X8D7 754 aa15.34■□□□□ 0.05
COL5A1-203ENST00000460264 ZNF691Q5VV52 312 aa15.34■□□□□ 0.05
COL5A1-203ENST00000460264 SERPINA12Q8IW75 414 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms