RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 ZNF799Q96GE5 643 aa3.29□□□□□ -1.88
HMGB1P26-201ENST00000452520 CDX2Q99626 313 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P26-201ENST00000452520 TPK1Q9H3S4 243 aa3.29□□□□□ -1.88
HMGB1P26-201ENST00000452520 FBXL15Q9H469 300 aa3.29□□□□□ -1.88
HMGB1P26-201ENST00000452520 ASB7Q9H672 318 aa3.29□□□□□ -1.88
HMGB1P26-201ENST00000452520 HMG20AQ9NP66 347 aa3.29□□□□□ -1.88
HMGB1P26-201ENST00000452520 DDX19AQ9NUU7 478 aaKnown RBP3.29□□□□□ -1.88
HMGB1P26-201ENST00000452520 RBM12B-AS1Q9P1G2 102 aa3.29□□□□□ -1.88
HMGB1P26-201ENST00000452520 CDC42BPBQ9Y5S2 1711 aa3.29□□□□□ -1.88
HMGB1P26-201ENST00000452520 ADAMTSL3P82987 1691 aa3.29□□□□□ -1.88
HMGB1P26-201ENST00000452520 TRBV6-6A0A0A6YYG2 114 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 IGHV3-72A0A0B4J1Y9 119 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 IGKV6-21A0A0C4DH24 114 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 TINCRA0A1B0GVN0 87 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 PINLYPA6NC86 204 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 CCRL2O00421 344 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 UPK2O00526 184 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 BIRC5O15392 142 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 ZW10O43264 779 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 YIF1AO95070 293 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 CTDNEP1O95476 244 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 CD74P04233 296 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 CCL23P55773 120 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 KRTAP12-2P59991 146 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 MLLT11Q13015 90 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 FADDQ13158 208 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 BCL2A1Q16548 175 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 GOLGA7BQ2TAP0 167 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 ZNF404Q494X3 552 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 TSPO2Q5TGU0 170 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 CYB5R2Q6BCY4 276 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 RIMKLAQ8IXN7 391 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 SLC26A10Q8NG04 563 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 STOML3Q8TAV4 291 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 PPP1R14BQ96C90 147 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 SMIM19Q96E16 107 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 NEURL3Q96EH8 262 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 ZNF382Q96SR6 550 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 SLC25A31Q9H0C2 315 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 OR51E2Q9H255 320 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 SPANXB1Q9NS25 103 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 FGFR1OP2Q9NVK5 253 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 INSIG2Q9Y5U4 225 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 PLB1Q6P1J6 1458 aa3.28□□□□□ -1.88
HMGB1P26-201ENST00000452520 NRCAMQ92823 1304 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 LOC389332A0A1B0GUA5 103 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 TMEM210A6NLX4 147 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 TRIM49D1C9J1S8 452 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 H0YJW9 148 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 I3L4J1 428 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 M0QZ92 97 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 PHYHO14832 338 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 FFAR1O14842 300 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 EIF1BO60739 113 aaKnown RBP3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 PDCD6O75340 191 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 APCSP02743 223 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 SLC2A1P11166 492 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 SPNP16150 400 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 ZNF823P16415 610 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 MDKP21741 143 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 EIF1P41567 113 aaKnown RBP3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 CDKN2CP42773 168 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 TGM4P49221 684 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 ZNF133P52736 654 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 PPP1CAP62136 330 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 ESRRGP62508 458 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 FAM3AP98173 230 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 LOXL1Q08397 574 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 MGAT3Q09327 533 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 SYCNQ0VAF6 134 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 GNA13Q14344 377 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 HLA-DRB5Q30154 266 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 RNASE13Q5GAN3 156 aaKnown RBP3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 IGFL2Q6UWQ7 119 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 GALNT10Q86SR1 603 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 SLC13A5Q86YT5 568 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 Q8N402 240 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 RNF175Q8N4F7 328 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 ARIH2OSQ8N7S6 290 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 GATD1Q8NB37 220 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 OR5W2Q8NH69 310 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 KCTD7Q96MP8 289 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 CCDC94Q9BW85 323 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 CDCA4Q9BXL8 241 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 IFI27L2Q9H2X8 130 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 C8orf17Q9NRJ1 99 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 BABAM2Q9NXR7 383 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 ZNF222Q9UK12 451 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 NEU3Q9UQ49 428 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 TP53TG1Q9Y2A0 90 aa3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 KLF13Q9Y2Y9 288 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P26-201ENST00000452520 DYSFO75923 2080 aa3.26□□□□□ -1.89
HMGB1P26-201ENST00000452520 TRAV8-2A0A0B4J237 113 aa3.26□□□□□ -1.89
HMGB1P26-201ENST00000452520 A0A0G2JMP0 313 aa3.26□□□□□ -1.89
HMGB1P26-201ENST00000452520 A0A0X1KG70 313 aa3.26□□□□□ -1.89
HMGB1P26-201ENST00000452520 A0A1W2PP18 115 aa3.26□□□□□ -1.89
HMGB1P26-201ENST00000452520 DAPL1A0PJW8 107 aa3.26□□□□□ -1.89
HMGB1P26-201ENST00000452520 BPY2O14599 106 aa3.26□□□□□ -1.89
HMGB1P26-201ENST00000452520 AZIN1O14977 448 aa3.26□□□□□ -1.89
HMGB1P26-201ENST00000452520 PFDN6O15212 129 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms