RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 CMTM5Q96DZ9 223 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 ZMYND19Q96E35 227 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 SEH1LQ96EE3 360 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 PPP1R36Q96LQ0 422 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 RDH12Q96NR8 316 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 RNF157Q96PX1 679 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 HBEGFQ99075 208 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 DCUN1D5Q9BTE7 237 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 ZNF717Q9BY31 904 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 DHX35Q9H5Z1 703 aaKnown RBP2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 CFL2Q9Y281 166 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 AP3M1Q9Y2T2 418 aa2.03□□□□□ -2.08
HMGB1P49-201ENST00000418882 KIAA0232Q92628 1395 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 ISPDA4D126 451 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 TMEM210A6NLX4 147 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 C9J4A7 227 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 F5H5T6 163 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 TNFRSF11BO00300 401 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 LYPLA2O95372 231 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 PSMG1O95456 288 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 RAB36O95755 333 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 CXCR1P25024 350 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 GTF2H1P32780 548 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 CDKN2CP42773 168 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 TGM4P49221 684 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 TAS2R46P59540 309 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 QPRTQ15274 297 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 RBMY1FQ15415 496 aaKnown RBP2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 TRIP13Q15645 432 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 GOLGA7BQ2TAP0 167 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 KRTAP6-3Q3LI67 103 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 ACTBL2Q562R1 376 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 SDHAF4Q5VUM1 108 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 XKRXQ6PP77 449 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 LINC00337Q8N6G1 96 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 COX18Q8N8Q8 333 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 OR4K17Q8NGC6 315 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 OR11H7Q8NGC8 314 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 OR10Z1Q8NGY1 313 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 NT5CQ8TCD5 201 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 CPNE4Q96A23 557 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 C18orf15Q96N68 181 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 VAT1Q99536 393 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 SULT4A1Q9BR01 284 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 MFSD1Q9H3U5 465 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 ANXA10Q9UJ72 324 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 RAB23Q9ULC3 237 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 SIGLEC7Q9Y286 467 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 MTCH2Q9Y6C9 303 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 USH1CQ9Y6N9 552 aa2.02□□□□□ -2.09
HMGB1P49-201ENST00000418882 ZNF608Q9ULD9 1512 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 SCN4AP35499 1836 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 TRAV8-4A0A0B4J246 113 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 IGHV1-69DA0A0B4J2H0 117 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 TINCRA0A1B0GVN0 87 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 FTCDNL1E5RQL4 147 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 SLC31A1O15431 190 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 DHRS3O75911 302 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 ATP6V1G2O95670 118 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 TRBV12-3P01733 135 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 P01737 135 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 CTXN2P0C2S0 81 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 SLC35G6P0C7Q6 338 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 MLNP12872 115 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 M6PRP20645 277 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 WARSP23381 471 aaKnown RBP2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 TSPOP30536 169 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 RAB38P57729 211 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 DSTNP60981 165 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 RPL10AP62906 217 aaKnown RBP2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 KDSRQ06136 332 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 C2orf54Q08AI8 447 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 INCA1Q0VD86 236 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 MLLT11Q13015 90 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 MED21Q13503 144 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 TBC1D28Q2M2D7 210 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 SLC36A2Q495M3 483 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 C6orf99Q4VX62 202 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 TMEM31Q5JXX7 168 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 FAM45BPQ6NSW5 357 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 USP50Q70EL3 339 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 OR8K1Q8NGG5 319 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 ZFAND1Q8TCF1 268 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 RTN4IP1Q8WWV3 396 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 PTX4Q96A99 478 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 NTAN1Q96AB6 310 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 CLDN23Q96B33 292 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 HAUS1Q96CS2 278 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 MRAP2Q96G30 205 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 KCNS1Q96KK3 526 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 PGLYRP3Q96LB9 341 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 DERL2Q9GZP9 239 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 FGF23Q9GZV9 251 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 DSN1Q9H410 356 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 ABCB9Q9NP78 766 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 MED4Q9NPJ6 270 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 C12orf4Q9NQ89 552 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 C3orf18Q9UK00 162 aa2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 NDRG2Q9UN36 371 aaKnown RBP2.01□□□□□ -2.09
HMGB1P49-201ENST00000418882 TRIOBPQ9H2D6 2365 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms