RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 PELI1Q96FA3 418 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 CPNE2Q96FN4 548 aaPredicted RBP11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 SSX3Q99909 188 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 ELL3Q9HB65 397 aaPredicted RBP11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 C8orf4Q9NR00 106 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 FBLN5Q9UBX5 448 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 MGAM2Q2M2H8 2515 aa11.85□□□□□ -0.51
NIF3L1-205ENST00000409588 TMEM212A6NML5 194 aa11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 OR4C45A6NMZ5 311 aa11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 M0QZ24 198 aa11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 SH2D1BO14796 132 aa11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 IGHA1P01876 353 aa11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 CCDC159P0C7I6 412 aa11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 DBTP11182 482 aaKnown RBP11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 AZGP1P25311 298 aaKnown RBP11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 ERP29P30040 261 aaKnown RBP11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 BMXP51813 675 aa11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 KLRD1Q13241 179 aa11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 LRRC75BQ2VPJ9 315 aa11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 ZNF676Q8N7Q3 588 aa11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 ZNF555Q8NEP9 628 aa11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 OR4M1Q8NGD0 313 aa11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 EMG1Q92979 244 aaKnown RBP11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 ADAT3Q96EY9 351 aaPredicted RBP11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 C4orf36Q96KX1 117 aa11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 OPALINQ96PE5 141 aa11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 ALG8Q9BVK2 526 aa11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 FAM118AQ9NWS6 357 aa11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 TBL2Q9Y4P3 447 aaKnown RBP11.84□□□□□ -0.51
NIF3L1-205ENST00000409588 IGKV1-9A0A0C4DH69 117 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 IRGMA1A4Y4 181 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 FAM90A8PA6NJQ4 464 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 VGLL3A8MV65 326 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 MGST3O14880 152 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 HAND1O96004 215 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 LMO1P25800 156 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 GBX2P52951 348 aaPredicted RBP11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 PROK1P58294 105 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 NANOS3P60323 173 aaKnown RBP11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 ZNF91Q05481 1191 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 CCDC58Q4VC31 144 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 Q6ZSV7 163 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 LHFPL3Q86UP9 236 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 PARP16Q8N5Y8 322 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 OR11H6Q8NGC7 330 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 OR13C3Q8NGS6 347 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 SLAMF9Q96A28 289 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 FOXRED1Q96CU9 486 aaPredicted RBP11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 ZNF714Q96N38 554 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 SLC29A1Q99808 456 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 JAM3Q9BX67 310 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 COMMD4Q9H0A8 199 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 ZCCHC4Q9H5U6 513 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 ERVK13-1Q9NX77 482 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 LINC00312Q9Y6C7 94 aa11.83□□□□□ -0.52
NIF3L1-205ENST00000409588 A0A1W2PRD5 423 aa11.82□□□□□ -0.52
NIF3L1-205ENST00000409588 A0A1W2PRF3 423 aa11.82□□□□□ -0.52
NIF3L1-205ENST00000409588 A0A1W2PRM7 423 aa11.82□□□□□ -0.52
NIF3L1-205ENST00000409588 F8VVB4 439 aa11.82□□□□□ -0.52
NIF3L1-205ENST00000409588 F8VWA3 439 aa11.82□□□□□ -0.52
NIF3L1-205ENST00000409588 DCKP27707 260 aa11.82□□□□□ -0.52
NIF3L1-205ENST00000409588 KIR2DS4P43632 304 aa11.82□□□□□ -0.52
NIF3L1-205ENST00000409588 CEBPDP49716 269 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-205ENST00000409588 DLX6P56179 175 aa11.82□□□□□ -0.52
NIF3L1-205ENST00000409588 EDDM3BP56851 147 aa11.82□□□□□ -0.52
NIF3L1-205ENST00000409588 CHST4Q8NCG5 386 aa11.82□□□□□ -0.52
NIF3L1-205ENST00000409588 OR5AK2Q8NH90 309 aa11.82□□□□□ -0.52
NIF3L1-205ENST00000409588 STMN2Q93045 179 aa11.82□□□□□ -0.52
NIF3L1-205ENST00000409588 RANBP3Q9H6Z4 567 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-205ENST00000409588 HMG20AQ9NP66 347 aa11.82□□□□□ -0.52
NIF3L1-205ENST00000409588 SMPD3Q9NY59 655 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-205ENST00000409588 UBE2J1Q9Y385 318 aaPredicted RBP11.82□□□□□ -0.52
NIF3L1-205ENST00000409588 H3BSH0 61 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 H3BUX3 64 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 MAGEB3O15480 346 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 KDM4BO94953 1096 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 IGHV1-8P0DP01 117 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 CCL3L1P16619 93 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 DLX1P56177 255 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 ZNF273Q14593 569 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 GRK1Q15835 563 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 ZSCAN26Q16670 478 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 MINOS1Q5TGZ0 78 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 TTC23Q5W5X9 447 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 SLC35E4Q6ICL7 350 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 OR52W1Q6IF63 320 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 PNKDQ8N490 385 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 TAF15Q92804 592 aaKnown RBP eCLIP11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 AJUBAQ96IF1 538 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 ZFAND3Q9H8U3 227 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 FGF20Q9NP95 211 aaPredicted RBP11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 PITPNC1Q9UKF7 332 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 MYRFQ9Y2G1 1151 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 MINOS1-NBL1R4GNA1 71 aa11.81□□□□□ -0.52
NIF3L1-205ENST00000409588 TMEM82A0PJX8 343 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 ZFPL1O95159 310 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 BAG2O95816 211 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 PRKACAP17612 351 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 BCL3P20749 454 aa11.8□□□□□ -0.52
NIF3L1-205ENST00000409588 GABRR1P24046 479 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms