RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 OR10K1Q8NGX5 313 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 OR6N2Q8NGY6 317 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 LGALS14Q8TCE9 139 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 RNASEH2CQ8TDP1 164 aaKnown RBP3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 ZFP90Q8TF47 636 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 C16orf78Q8WTQ4 265 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 LRRC29Q8WV35 223 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 TMEM158Q8WZ71 300 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 FAM104AQ969W3 186 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 TMBIM1Q969X1 311 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 PTH2Q96A98 100 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 C14orf144Q96I85 54 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 ZNF414Q96IQ9 312 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 TIMM29Q9BSF4 260 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 DDA1Q9BW61 102 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 ULBP1Q9BZM6 244 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 PORCNQ9H237 461 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 NLE1Q9NVX2 485 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 TAS2R1Q9NYW7 299 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 USE1Q9NZ43 259 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 GSKIPQ9P0R6 139 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 DKKL1Q9UK85 242 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 CES1P1Q9UKY3 287 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 ZNF337Q9Y3M9 751 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 UBIAD1Q9Y5Z9 338 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 ALG5Q9Y673 324 aa3.29□□□□□ -1.88
HMGB1P13-201ENST00000406019 ERCC6Q03468 1493 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 UHRF1BP1Q6BDS2 1440 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 TDRD6O60522 2096 aaKnown RBP3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 A0A0J9YXV3 536 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 A0A1B0GV72 72 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 A0A1W2PNU3 283 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 DISC1C4P0D8 188 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 H0Y980 276 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 K7EN84 100 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 CCDC22O60826 627 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 GCGP01275 180 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 IFNA21P01568 189 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 RBP1P09455 135 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 F8A1P23610 371 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 MAGEA3P43357 314 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 MAGOHP61326 146 aaKnown RBP3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 FAM3AP98173 230 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 IL5RAQ01344 420 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 CKAP4Q07065 602 aaKnown RBP3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 KRR1Q13601 381 aaKnown RBP3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 OR4D1Q15615 310 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 GRK1Q15835 563 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 DEFB115Q30KQ5 88 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 TIMM23BQ5SRD1 257 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 CPTPQ5TA50 214 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 ZNF429Q86V71 674 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 OR11H7Q8NGC8 314 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 PIGXQ8TBF5 258 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 TMEM239Q8WW34 195 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 TESCQ96BS2 214 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 OR2V2Q96R30 315 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 TSNAXQ99598 290 aaKnown RBP3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 KIFC1Q9BW19 673 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 OSBPL11Q9BXB4 747 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 SLIRPQ9GZT3 109 aaKnown RBP3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 RHOFQ9HBH0 211 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 FAM49BQ9NUQ9 324 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 MAT2BQ9NZL9 334 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 CECR2Q9BXF3 1484 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 RAPGEF2Q9Y4G8 1499 aa3.28□□□□□ -1.88
HMGB1P13-201ENST00000406019 PALLDQ8WX93 1383 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 ASTN1O14525 1302 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 DNMBPQ6XZF7 1577 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 IGLV11-55A0A075B6I3 123 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 IGHV3-66A0A0C4DH42 116 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 ANKRD20A5PA0PJZ0 165 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 F5H5T6 163 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 CLDN34H7C241 214 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 DFFAO00273 331 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 DLEU1O43261 78 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 ALOX12BO75342 701 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 RP2O75695 350 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 CNIH1O95406 144 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 CD74P04233 296 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 HLA-DPB1P04440 258 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 CDK1P06493 297 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 PET100P0DJ07 73 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 MUC1P15941 1255 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 LOXP28300 417 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 ACOT2P49753 483 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 AKR1D1P51857 326 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 HCCSP53701 268 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 CLDN12P56749 244 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 RAB31Q13636 194 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 TNFAIP8L3Q5GJ75 292 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 SPIN3Q5JUX0 258 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 IDNKQ5T6J7 187 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 FBXW9Q5XUX1 488 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 CEMP1Q6PRD7 247 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 RAB43Q86YS6 212 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 METTL13Q8N6R0 699 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 CLDN22Q8N7P3 220 aa3.27□□□□□ -1.89
HMGB1P13-201ENST00000406019 COX18Q8N8Q8 333 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms