RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 WSB2Q9NYS7 404 aaPredicted RBP12.39□□□□□ -0.43
RERE-204ENST00000400908 CDC42EP3Q9UKI2 254 aa12.39□□□□□ -0.43
RERE-204ENST00000400908 C19orf53Q9UNZ5 99 aaPredicted RBP12.39□□□□□ -0.43
RERE-204ENST00000400908 PSG11Q9UQ72 335 aa12.39□□□□□ -0.43
RERE-204ENST00000400908 MED19A0JLT2 244 aaPredicted RBP12.39□□□□□ -0.43
RERE-204ENST00000400908 BTF3P20290 206 aaKnown RBP12.39□□□□□ -0.43
RERE-204ENST00000400908 RAB32Q13637 225 aa12.39□□□□□ -0.43
RERE-204ENST00000400908 ALKBH6Q3KRA9 238 aa12.39□□□□□ -0.43
RERE-204ENST00000400908 ZNF766Q5HY98 468 aa12.39□□□□□ -0.43
RERE-204ENST00000400908 MAMSTRQ6ZN01 415 aa12.39□□□□□ -0.43
RERE-204ENST00000400908 ZNF740Q8NDX6 193 aa12.39□□□□□ -0.43
RERE-204ENST00000400908 VN1R1Q9GZP7 353 aa12.39□□□□□ -0.43
RERE-204ENST00000400908 SLCO1C1Q9NYB5 712 aa12.39□□□□□ -0.43
RERE-204ENST00000400908 CACNG5Q9UF02 275 aa12.39□□□□□ -0.43
RERE-204ENST00000400908 AMMECR1Q9Y4X0 333 aaPredicted RBP12.39□□□□□ -0.43
RERE-204ENST00000400908 MYO9BQ13459 2157 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 COL4A5P29400 1685 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 SLC17A2O00624 439 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 MBPP02686 304 aaPredicted RBP12.38□□□□□ -0.43
RERE-204ENST00000400908 CSNK1EP49674 416 aaKnown RBP12.38□□□□□ -0.43
RERE-204ENST00000400908 IL24Q13007 206 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 FZD2Q14332 565 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 XKR7Q5GH72 579 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 SPPL3Q8TCT6 385 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 PP6455Q8WZ26 134 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 PTX4Q96A99 478 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 SDF2Q99470 211 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 ZNF391Q9UJN7 358 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 LIPGQ9Y5X9 500 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 AUP1Q9Y679 476 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 ANKRD31Q8N7Z5 1873 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 J3KRW8 73 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 IER3P46695 156 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 C6orf15Q6UXA7 325 aaPredicted RBP12.38□□□□□ -0.43
RERE-204ENST00000400908 ADAMTSL4Q6UY14 1074 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 MAVSQ7Z434 540 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 TAAR3PQ9P1P4 343 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 A4GNTQ9UNA3 340 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 SLCO2B1O94956 709 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 NGFP01138 241 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 PGA4P0DJD7 388 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 PGA5P0DJD9 388 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 NPBWR2P48146 333 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 HINT1P49773 126 aaPredicted RBP12.38□□□□□ -0.43
RERE-204ENST00000400908 LHX8Q68G74 356 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 PRSS54Q6PEW0 395 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 PELI3Q8N2H9 469 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 SPICQ8N5J4 248 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 APOBEC3DQ96AK3 386 aaPredicted RBP12.38□□□□□ -0.43
RERE-204ENST00000400908 SARGQ9BW04 601 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 DLK1P80370 383 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 FBXL17Q9UF56 701 aa12.38□□□□□ -0.43
RERE-204ENST00000400908 FAM74A7A6NL05 159 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 SPRY3O43610 288 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 SPNP16150 400 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 FAHP16930 419 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 CD22P20273 847 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 SLC25A35Q3KQZ1 300 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 WDFY1Q8IWB7 410 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 LINC00469Q8N7U9 141 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 ISOC2Q96AB3 205 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 YIPF6Q96EC8 236 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 PLPPR2Q96GM1 343 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 ERRFI1Q9UJM3 462 aaPredicted RBP12.37□□□□□ -0.43
RERE-204ENST00000400908 VSIG4Q9Y279 399 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 CXCL13O43927 109 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 TSPAN12O95859 305 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 KMT5CQ86Y97 462 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 ZCCHC14Q8WYQ9 949 aaKnown RBP12.37□□□□□ -0.43
RERE-204ENST00000400908 ATOH1Q92858 354 aaPredicted RBP12.37□□□□□ -0.43
RERE-204ENST00000400908 ZNF831Q5JPB2 1677 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 GP1BAP07359 652 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 MYOGP15173 224 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 BSGP35613 385 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 DUSP8Q13202 625 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 FAM74A3Q4VXF1 159 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 LRRC75AQ8NAA5 344 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 SNRNP40Q96DI7 357 aaKnown RBP12.37□□□□□ -0.43
RERE-204ENST00000400908 MED29Q9NX70 200 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 LINC01553A4QN01 128 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 CD74P04233 296 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 HIST1H1EP10412 219 aaKnown RBP12.37□□□□□ -0.43
RERE-204ENST00000400908 B4GALT1P15291 398 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 CTGFP29279 349 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 KLF3P57682 345 aaPredicted RBP12.37□□□□□ -0.43
RERE-204ENST00000400908 MICBQ29980 383 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 HES3Q5TGS1 186 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 AFMIDQ63HM1 303 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 DERL3Q96Q80 235 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 HMGN4O00479 90 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 MPC2O95563 127 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 HAND1O96004 215 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 GABRA1P14867 456 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 MDH2P40926 338 aaKnown RBP12.37□□□□□ -0.43
RERE-204ENST00000400908 PAFAH1B2P68402 229 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 PSG5Q15238 335 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 FBXL14Q8N1E6 418 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 LRRC3BQ96PB8 259 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 CHRNA10Q9GZZ6 450 aa12.37□□□□□ -0.43
RERE-204ENST00000400908 SLC17A5Q9NRA2 495 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms