RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CELA3BP08861 270 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 FAM90A15PP0C7V4 464 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 FAM90A13PP0C7W8 464 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 FAM90A14PP0C7W9 464 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 FAM90A24PP0C7X0 464 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 CHATP28329 748 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 MRPS15P82914 257 aaKnown RBP12.9□□□□□ -0.34
SCAF11-204ENST00000395454 DAZAP2Q15038 168 aaPredicted RBP12.9□□□□□ -0.34
SCAF11-204ENST00000395454 MICBQ29980 383 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 NHLRC3Q5JS37 347 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 MYPOPQ86VE0 399 aaPredicted RBP12.9□□□□□ -0.34
SCAF11-204ENST00000395454 CALHM1Q8IU99 346 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 OR5A2Q8NGI9 324 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 OR4K15Q8NH41 348 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 OR2A7Q96R45 310 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 ELL3Q9HB65 397 aaPredicted RBP12.9□□□□□ -0.34
SCAF11-204ENST00000395454 DLL4Q9NR61 685 aa12.9□□□□□ -0.34
SCAF11-204ENST00000395454 EIF3KQ9UBQ5 218 aaKnown RBP12.9□□□□□ -0.34
SCAF11-204ENST00000395454 G3V3Q6 166 aa12.9□□□□□ -0.35
SCAF11-204ENST00000395454 H3BUI4 141 aa12.9□□□□□ -0.35
SCAF11-204ENST00000395454 M0R1B8 84 aa12.9□□□□□ -0.35
SCAF11-204ENST00000395454 SMPD2O60906 423 aa12.9□□□□□ -0.35
SCAF11-204ENST00000395454 HTR3BO95264 441 aa12.9□□□□□ -0.35
SCAF11-204ENST00000395454 CLDN1O95832 211 aa12.9□□□□□ -0.35
SCAF11-204ENST00000395454 CBR1P16152 277 aa12.9□□□□□ -0.35
SCAF11-204ENST00000395454 FAHD2BQ6P2I3 314 aaPredicted RBP12.9□□□□□ -0.35
SCAF11-204ENST00000395454 SSX8Q7RTT4 187 aa12.9□□□□□ -0.35
SCAF11-204ENST00000395454 OSR2Q8N2R0 312 aa12.9□□□□□ -0.35
SCAF11-204ENST00000395454 ZNF611Q8N823 705 aa12.9□□□□□ -0.35
SCAF11-204ENST00000395454 EMG1Q92979 244 aaKnown RBP12.9□□□□□ -0.35
SCAF11-204ENST00000395454 FAHD2AQ96GK7 314 aa12.9□□□□□ -0.35
SCAF11-204ENST00000395454 CYYR1Q96J86 154 aa12.9□□□□□ -0.35
SCAF11-204ENST00000395454 RANBP3Q9H6Z4 567 aaPredicted RBP12.9□□□□□ -0.35
SCAF11-204ENST00000395454 PKDREJQ9NTG1 2253 aa12.9□□□□□ -0.35
SCAF11-204ENST00000395454 RLN1P04808 185 aa12.89□□□□□ -0.35
SCAF11-204ENST00000395454 SFTPBP07988 381 aa12.89□□□□□ -0.35
SCAF11-204ENST00000395454 GIPP09681 153 aaPredicted RBP12.89□□□□□ -0.35
SCAF11-204ENST00000395454 RBM11P57052 281 aaKnown RBP12.89□□□□□ -0.35
SCAF11-204ENST00000395454 TAS2R46P59540 309 aa12.89□□□□□ -0.35
SCAF11-204ENST00000395454 ARFRP1Q13795 201 aa12.89□□□□□ -0.35
SCAF11-204ENST00000395454 FAM169BQ8N8A8 192 aa12.89□□□□□ -0.35
SCAF11-204ENST00000395454 OR51F2Q8NH61 342 aa12.89□□□□□ -0.35
SCAF11-204ENST00000395454 ASB13Q8WXK3 278 aa12.89□□□□□ -0.35
SCAF11-204ENST00000395454 OR5P3Q8WZ94 311 aa12.89□□□□□ -0.35
SCAF11-204ENST00000395454 DACT3Q96B18 629 aaPredicted RBP12.89□□□□□ -0.35
SCAF11-204ENST00000395454 ZNF69Q9UC07 566 aa12.89□□□□□ -0.35
SCAF11-204ENST00000395454 ZNF222Q9UK12 451 aa12.89□□□□□ -0.35
SCAF11-204ENST00000395454 UBE2QL1A1L167 161 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 OR5B21A6NL26 309 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 OR2AT4A6NND4 320 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 TPD52L2O43399 206 aaKnown RBP12.88□□□□□ -0.35
SCAF11-204ENST00000395454 CECR9P0C854 216 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 IGFBP2P18065 325 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 DTYMKP23919 212 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 C1QTNF12Q5T7M4 302 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 LAMTOR1Q6IAA8 161 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 C6orf201Q7Z4U5 140 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 SLC25A42Q86VD7 318 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 LHFPL1Q86WI0 220 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 DMRTC2Q8IXT2 367 aaPredicted RBP12.88□□□□□ -0.35
SCAF11-204ENST00000395454 MUC20Q8N307 709 aaPredicted RBP12.88□□□□□ -0.35
SCAF11-204ENST00000395454 ZNF431Q8TF32 576 aaPredicted RBP12.88□□□□□ -0.35
SCAF11-204ENST00000395454 CHST6Q9GZX3 395 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 NGBQ9NPG2 151 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 PIPOXQ9P0Z9 390 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 VSIG4Q9Y279 399 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 IGHV1-18A0A0C4DH31 117 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 IGLV1-44P01699 117 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 OR4E1P0C645 316 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 MPPED2Q15777 294 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 TAF9Q16594 264 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 NKPD1Q17RQ9 610 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 MEX3BQ6ZN04 569 aaKnown RBP12.88□□□□□ -0.35
SCAF11-204ENST00000395454 FBXL14Q8N1E6 418 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 PLEKHJ1Q9NW61 149 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 EDARQ9UNE0 448 aa12.88□□□□□ -0.35
SCAF11-204ENST00000395454 LRBAP50851 2863 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 ABCA4P78363 2273 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 NBPF19A0A087WUL8 3843 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 ANKRD30BLA7E2S9 258 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 SMLR1H3BR10 107 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 TUBG1P23258 451 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 GABRR1P24046 479 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 TMEM108Q6UXF1 575 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 SLC25A26Q70HW3 274 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 NLRC3Q7RTR2 1065 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 PEG10Q86TG7 708 aaKnown RBP12.87□□□□□ -0.35
SCAF11-204ENST00000395454 C9orf62Q8N4C0 152 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 OR10AD1Q8NGE0 317 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 OR52B4Q8NGK2 314 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 TERB2Q8NHR7 220 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 CAPSLQ8WWF8 208 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 FN3KRPQ9HA64 309 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 TUBG2Q9NRH3 451 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 CA10Q9NS85 328 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 MGAT4CQ9UBM8 478 aa12.87□□□□□ -0.35
SCAF11-204ENST00000395454 NOP16Q9Y3C1 178 aaKnown RBP12.87□□□□□ -0.35
SCAF11-204ENST00000395454 GEMIN2O14893 280 aaKnown RBP12.86□□□□□ -0.35
SCAF11-204ENST00000395454 PDCD6O75340 191 aa12.86□□□□□ -0.35
SCAF11-204ENST00000395454 PLATP00750 562 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms