RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 C8orf46Q8TAG6 207 aa17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 TNFAIP8L1Q8WVP5 186 aa17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 UFD1Q92890 307 aa17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 CPNE2Q96FN4 548 aaPredicted RBP17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 TMED9Q9BVK6 235 aa17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 YTHDF1Q9BYJ9 559 aaKnown RBP17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 SEBOXQ9HB31 216 aaPredicted RBP17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 NOX4Q9NPH5 578 aa17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 CKLFQ9UBR5 152 aa17.32■□□□□ 0.36
MAP1LC3A-202ENST00000374837 MXRA5Q9NR99 2828 aa17.31■□□□□ 0.36
MAP1LC3A-202ENST00000374837 MMP9P14780 707 aa17.31■□□□□ 0.36
MAP1LC3A-202ENST00000374837 FSTP19883 344 aa17.31■□□□□ 0.36
MAP1LC3A-202ENST00000374837 EPHA1P21709 976 aa17.31■□□□□ 0.36
MAP1LC3A-202ENST00000374837 SNU13P55769 128 aaKnown RBP17.31■□□□□ 0.36
MAP1LC3A-202ENST00000374837 MLLT11Q13015 90 aaPredicted RBP17.31■□□□□ 0.36
MAP1LC3A-202ENST00000374837 DDI2Q5TDH0 399 aa17.31■□□□□ 0.36
MAP1LC3A-202ENST00000374837 FIP1L1Q6UN15 594 aaKnown RBP17.31■□□□□ 0.36
MAP1LC3A-202ENST00000374837 PXT1Q8NFP0 134 aa17.31■□□□□ 0.36
MAP1LC3A-202ENST00000374837 DMRTB1Q96MA1 342 aa17.31■□□□□ 0.36
MAP1LC3A-202ENST00000374837 WDFY2Q96P53 400 aa17.31■□□□□ 0.36
MAP1LC3A-202ENST00000374837 SIRPDQ9H106 197 aa17.31■□□□□ 0.36
MAP1LC3A-202ENST00000374837 FOXJ3Q9UPW0 622 aa17.31■□□□□ 0.36
MAP1LC3A-202ENST00000374837 NBEAL1Q6ZS30 2694 aa17.31■□□□□ 0.36
MAP1LC3A-202ENST00000374837 WNK2Q9Y3S1 2297 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 IGHV3OR16-10A0A075B7F0 116 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 MAGEA13PA6NCF6 341 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 K7N7A8 449 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 MRPS14O60783 128 aaKnown RBP17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 ZNF737O75373 536 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 TOX4O94842 621 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 HAND1O96004 215 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 TK1P04183 234 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 ZNF93P35789 620 aaPredicted RBP17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 ZNF146Q15072 292 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 TBCEQ15813 527 aaPredicted RBP17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 ASCL4Q6XD76 172 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 THRSPQ92748 146 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 TBX15Q96SF7 602 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 MGLLQ99685 303 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 PCGF1Q9BSM1 259 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 FAM234AQ9H0X4 552 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 RHOFQ9HBH0 211 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 ACOT13Q9NPJ3 140 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 NUP50Q9UKX7 468 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 GSTK1Q9Y2Q3 226 aa17.3■□□□□ 0.36
MAP1LC3A-202ENST00000374837 TMEM82A0PJX8 343 aa17.29■□□□□ 0.36
MAP1LC3A-202ENST00000374837 IGHV4-38-2P0DP08 117 aa17.29■□□□□ 0.36
MAP1LC3A-202ENST00000374837 MAPK3P27361 379 aaPredicted RBP17.29■□□□□ 0.36
MAP1LC3A-202ENST00000374837 PTGFRP43088 359 aa17.29■□□□□ 0.36
MAP1LC3A-202ENST00000374837 OR3A4PP47883 348 aa17.29■□□□□ 0.36
MAP1LC3A-202ENST00000374837 EMX1Q04741 257 aaPredicted RBP17.29■□□□□ 0.36
MAP1LC3A-202ENST00000374837 SCGB2A2Q13296 93 aa17.29■□□□□ 0.36
MAP1LC3A-202ENST00000374837 SPIN3Q5JUX0 258 aa17.29■□□□□ 0.36
MAP1LC3A-202ENST00000374837 METTL11BQ5VVY1 283 aa17.29■□□□□ 0.36
MAP1LC3A-202ENST00000374837 ASCC1Q8N9N2 400 aaKnown RBP17.29■□□□□ 0.36
MAP1LC3A-202ENST00000374837 TMEM203Q969S6 136 aa17.29■□□□□ 0.36
MAP1LC3A-202ENST00000374837 OCEL1Q9H607 264 aa17.29■□□□□ 0.36
MAP1LC3A-202ENST00000374837 ONECUT1Q9UBC0 465 aa17.29■□□□□ 0.36
MAP1LC3A-202ENST00000374837 KPTNQ9Y664 436 aa17.29■□□□□ 0.36
MAP1LC3A-202ENST00000374837 TRBV23-1A0A0A0MS06 115 aa17.28■□□□□ 0.36
MAP1LC3A-202ENST00000374837 MAS1P04201 325 aa17.28■□□□□ 0.36
MAP1LC3A-202ENST00000374837 CPEP16870 476 aa17.28■□□□□ 0.36
MAP1LC3A-202ENST00000374837 GP2P55259 537 aaKnown RBP17.28■□□□□ 0.36
MAP1LC3A-202ENST00000374837 FAM27D1Q5T7N8 215 aa17.28■□□□□ 0.36
MAP1LC3A-202ENST00000374837 ELP2Q6IA86 826 aa17.28■□□□□ 0.36
MAP1LC3A-202ENST00000374837 C17orf107Q6ZR85 190 aa17.28■□□□□ 0.36
MAP1LC3A-202ENST00000374837 ZNF367Q7RTV3 350 aa17.28■□□□□ 0.36
MAP1LC3A-202ENST00000374837 CEACAM19Q7Z692 300 aa17.28■□□□□ 0.36
MAP1LC3A-202ENST00000374837 OR4M1Q8NGD0 313 aa17.28■□□□□ 0.36
MAP1LC3A-202ENST00000374837 C22orf15Q8WYQ4 148 aa17.28■□□□□ 0.36
MAP1LC3A-202ENST00000374837 SNX22Q96L94 193 aa17.28■□□□□ 0.36
MAP1LC3A-202ENST00000374837 FAM192AQ9GZU8 254 aa17.28■□□□□ 0.36
MAP1LC3A-202ENST00000374837 C19orf12Q9NSK7 152 aa17.28■□□□□ 0.36
MAP1LC3A-202ENST00000374837 ZNF69Q9UC07 566 aa17.28■□□□□ 0.36
MAP1LC3A-202ENST00000374837 GLS2Q9UI32 602 aa17.28■□□□□ 0.36
MAP1LC3A-202ENST00000374837 ING4Q9UNL4 249 aa17.28■□□□□ 0.36
MAP1LC3A-202ENST00000374837 LRRC42Q9Y546 428 aa17.28■□□□□ 0.36
MAP1LC3A-202ENST00000374837 TRAV40A0A0B4J280 105 aa17.27■□□□□ 0.36
MAP1LC3A-202ENST00000374837 A0A1W2PQ09 198 aa17.27■□□□□ 0.36
MAP1LC3A-202ENST00000374837 SH2D1BO14796 132 aa17.27■□□□□ 0.36
MAP1LC3A-202ENST00000374837 SC5DO75845 299 aa17.27■□□□□ 0.36
MAP1LC3A-202ENST00000374837 CDRT1O95170 752 aa17.27■□□□□ 0.36
MAP1LC3A-202ENST00000374837 MTNR1BP49286 362 aa17.27■□□□□ 0.36
MAP1LC3A-202ENST00000374837 RPS25P62851 125 aaKnown RBP17.27■□□□□ 0.36
MAP1LC3A-202ENST00000374837 PHC2Q8IXK0 858 aa17.27■□□□□ 0.36
MAP1LC3A-202ENST00000374837 FAM185AQ8N0U4 392 aa17.27■□□□□ 0.36
MAP1LC3A-202ENST00000374837 SPARTQ8N0X7 666 aa17.27■□□□□ 0.36
MAP1LC3A-202ENST00000374837 Q8NFD4 153 aa17.27■□□□□ 0.36
MAP1LC3A-202ENST00000374837 OR10K1Q8NGX5 313 aa17.27■□□□□ 0.36
MAP1LC3A-202ENST00000374837 PPIL3Q9H2H8 161 aaKnown RBP17.27■□□□□ 0.36
MAP1LC3A-202ENST00000374837 EXOSC4Q9NPD3 245 aaKnown RBP17.27■□□□□ 0.36
MAP1LC3A-202ENST00000374837 SF3B6Q9Y3B4 125 aaKnown RBP17.27■□□□□ 0.36
MAP1LC3A-202ENST00000374837 SIRPB1O00241 398 aa17.26■□□□□ 0.35
MAP1LC3A-202ENST00000374837 PSPNO60542 156 aa17.26■□□□□ 0.35
MAP1LC3A-202ENST00000374837 OR2H2O95918 312 aa17.26■□□□□ 0.35
MAP1LC3A-202ENST00000374837 FPR2P25090 351 aa17.26■□□□□ 0.35
MAP1LC3A-202ENST00000374837 BMXP51813 675 aa17.26■□□□□ 0.35
MAP1LC3A-202ENST00000374837 RPL31P62899 125 aaKnown RBP17.26■□□□□ 0.35
MAP1LC3A-202ENST00000374837 RSU1Q15404 277 aa17.26■□□□□ 0.35
MAP1LC3A-202ENST00000374837 TMEM200BQ69YZ2 307 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms