RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 DKKL1Q9UK85 242 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 ST3GAL6Q9Y274 331 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 A0A0U1RQV5 110 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 UMAD1C9J7I0 102 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 ZNF14P17017 642 aaPredicted RBP17.22■□□□□ 0.35
CRLF3-201ENST00000324238 FABP9Q0Z7S8 132 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 NSUN5P2Q63ZY6 315 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 ZNF385CQ66K41 422 aaPredicted RBP17.22■□□□□ 0.35
CRLF3-201ENST00000324238 FADS6Q8N9I5 356 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 IFI44Q8TCB0 444 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 BORCS8Q96FH0 119 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 TP53RKQ96S44 253 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 FAM212BQ9NTI7 297 aaPredicted RBP17.22■□□□□ 0.35
CRLF3-201ENST00000324238 TNFSF12O43508 249 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 NPBWR2P48146 333 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 B2MP61769 119 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 TMEM123Q8N131 208 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 SPTSSAQ969W0 71 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 NECAP2Q9NVZ3 263 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 ATPIF1Q9UII2 106 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 TIMM10BQ9Y5J6 103 aa17.22■□□□□ 0.35
CRLF3-201ENST00000324238 MAP1BP46821 2468 aaKnown RBP17.21■□□□□ 0.35
CRLF3-201ENST00000324238 IGLV3-32A0A0A0MS00 114 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 OR7C1O76099 320 aaPredicted RBP17.21■□□□□ 0.35
CRLF3-201ENST00000324238 FBP1P09467 338 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 ZNF32P17041 273 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 CCNOP22674 350 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 FAM189A2Q15884 450 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 OPN5Q6U736 354 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 DMBX1Q8NFW5 382 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 SAP25Q8TEE9 199 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 CFAP47Q6ZTR5 3102 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 HEXAP06865 529 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 CCL2P13500 99 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 AADACP22760 399 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 DUSP1P28562 367 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 ZNF84P51523 738 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 SURF2Q15527 256 aaPredicted RBP17.21■□□□□ 0.35
CRLF3-201ENST00000324238 CARFQ8N187 725 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 TMEM217Q8N7C4 229 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 ZFP62Q8NB50 900 aaPredicted RBP17.21■□□□□ 0.35
CRLF3-201ENST00000324238 ADPRHL1Q8NDY3 354 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 HS3ST6Q96QI5 342 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 ZNF442Q9H7R0 627 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 PROK2Q9HC23 129 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 C19orf12Q9NSK7 152 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 GHRLQ9UBU3 117 aa17.21■□□□□ 0.35
CRLF3-201ENST00000324238 DNAJC13O75165 2243 aa17.2■□□□□ 0.34
CRLF3-201ENST00000324238 PRSS44E7EML9 344 aa17.2■□□□□ 0.34
CRLF3-201ENST00000324238 TP53I11O14683 189 aa17.2■□□□□ 0.34
CRLF3-201ENST00000324238 TRAPPC6AO75865 159 aa17.2■□□□□ 0.34
CRLF3-201ENST00000324238 DKK1O94907 266 aa17.2■□□□□ 0.34
CRLF3-201ENST00000324238 APOC1P02654 83 aa17.2■□□□□ 0.34
CRLF3-201ENST00000324238 EIF1P41567 113 aaKnown RBP17.2■□□□□ 0.34
CRLF3-201ENST00000324238 ALDH3B1P43353 468 aa17.2■□□□□ 0.34
CRLF3-201ENST00000324238 HTR5AP47898 357 aa17.2■□□□□ 0.34
CRLF3-201ENST00000324238 STARD6P59095 220 aa17.2■□□□□ 0.34
CRLF3-201ENST00000324238 POLR2GP62487 172 aaKnown RBP eCLIP17.2■□□□□ 0.34
CRLF3-201ENST00000324238 PCOLCEQ15113 449 aa17.2■□□□□ 0.34
CRLF3-201ENST00000324238 SLC35G3Q8N808 338 aa17.2■□□□□ 0.34
CRLF3-201ENST00000324238 NIT2Q9NQR4 276 aa17.2■□□□□ 0.34
CRLF3-201ENST00000324238 NKX2-6A6NCS4 301 aa17.2■□□□□ 0.34
CRLF3-201ENST00000324238 SPIN3Q5JUX0 258 aa17.2■□□□□ 0.34
CRLF3-201ENST00000324238 CALHM1Q8IU99 346 aa17.2■□□□□ 0.34
CRLF3-201ENST00000324238 MAML2Q8IZL2 1156 aaPredicted RBP17.2■□□□□ 0.34
CRLF3-201ENST00000324238 SCRT1Q9BWW7 348 aa17.2■□□□□ 0.34
CRLF3-201ENST00000324238 C19orf25Q9UFG5 118 aaPredicted RBP17.2■□□□□ 0.34
CRLF3-201ENST00000324238 ZNF727A8MUV8 499 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 E5RGE8 158 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 ZNF587BE7ETH6 402 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 UMODP07911 640 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 JMJD7P0C870 316 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 CTSSP25774 331 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 CHATP28329 748 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 FAM3AP98173 230 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 ZNF92Q03936 586 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 UBAC2Q8NBM4 344 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 HLA-CQ95604 372 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 TMEM54Q969K7 222 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 NSG2Q9Y328 171 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 STARD10Q9Y365 291 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 PQLC2LA1A4F0 135 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 CST7O76096 145 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 NRASP01111 189 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 DANCRP0C864 163 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 OTX2P32243 289 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 RBP2P50120 134 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 ESPL1Q14674 2120 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 NCMAPQ5T1S8 102 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 IL36RNQ9UBH0 155 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 KLK3P07288 261 aaPredicted RBP17.19■□□□□ 0.34
CRLF3-201ENST00000324238 KPTNQ9Y664 436 aa17.19■□□□□ 0.34
CRLF3-201ENST00000324238 GAPDHP04406 335 aaKnown RBP17.18■□□□□ 0.34
CRLF3-201ENST00000324238 NTNG2Q96CW9 530 aa17.18■□□□□ 0.34
CRLF3-201ENST00000324238 MSI2Q96DH6 328 aaKnown RBP17.18■□□□□ 0.34
CRLF3-201ENST00000324238 MMP24Q9Y5R2 645 aa17.18■□□□□ 0.34
CRLF3-201ENST00000324238 TRBV23-1A0A0A0MS06 115 aa17.18■□□□□ 0.34
CRLF3-201ENST00000324238 OTX1P32242 354 aaPredicted RBP17.18■□□□□ 0.34
CRLF3-201ENST00000324238 IGFBP7Q16270 282 aa17.18■□□□□ 0.34
CRLF3-201ENST00000324238 C10orf128Q5T292 105 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms