RNA–Protein interactions for RNA: ENST00000276062.8

NDUFB11-201, Transcript of NADH:ubiquinone oxidoreductase subunit B11, humanhuman

TSL 1 (best) BASIC

Gene NDUFB11, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB11-201ENST00000276062 ZNF488Q96MN9 340 aa11.13□□□□□ -0.63
NDUFB11-201ENST00000276062 TSC22D3Q99576 134 aa11.13□□□□□ -0.63
NDUFB11-201ENST00000276062 NUDT16L1Q9BRJ7 211 aaKnown RBP11.13□□□□□ -0.63
NDUFB11-201ENST00000276062 LPAR5Q9H1C0 372 aa11.13□□□□□ -0.63
NDUFB11-201ENST00000276062 MIXL1Q9H2W2 232 aa11.13□□□□□ -0.63
NDUFB11-201ENST00000276062 SEBOXQ9HB31 216 aaPredicted RBP11.13□□□□□ -0.63
NDUFB11-201ENST00000276062 BARX1Q9HBU1 254 aaPredicted RBP11.13□□□□□ -0.63
NDUFB11-201ENST00000276062 SPACA1Q9HBV2 294 aa11.13□□□□□ -0.63
NDUFB11-201ENST00000276062 HES4Q9HCC6 221 aa11.13□□□□□ -0.63
NDUFB11-201ENST00000276062 MYOZ1Q9NP98 299 aaPredicted RBP11.13□□□□□ -0.63
NDUFB11-201ENST00000276062 DNHD1Q96M86 4753 aa11.13□□□□□ -0.63
NDUFB11-201ENST00000276062 TRAV38-1A0A0B4J264 116 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 A0A1W2PP11 408 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 FABP12A6NFH5 140 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 TMEM178BH3BS89 294 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 SH2D1BO14796 132 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 XRCC3O43542 346 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 EIF4EP06730 217 aaKnown RBP11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 DAOP14920 347 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 MUC1P15941 1255 aaPredicted RBP11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 NR4A2P43354 598 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 VEGFCP49767 419 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 EFNB2P52799 333 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 PITPNAQ00169 270 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 ZNF45Q02386 682 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 ZNF146Q15072 292 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 MICBQ29980 383 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 BOLLQ8N9W6 283 aaKnown RBP11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 OR10R2Q8NGX6 335 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 NEDD4LQ96PU5 975 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 GAL3ST1Q99999 423 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 KCNK15Q9H427 330 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 EXTL2Q9UBQ6 330 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 PLEKHA6Q9Y2H5 1048 aa11.12□□□□□ -0.63
NDUFB11-201ENST00000276062 TANC2Q9HCD6 1990 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 PPIAL4EA0A075B759 164 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 CLDN25C9JDP6 229 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 PPIAL4DF5H284 164 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 F8VVB4 439 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 F8VWA3 439 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 LGALS8O00214 317 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 DEGS1O15121 323 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 NDUFA2O43678 99 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 FSTL3O95633 263 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 CYB5R3P00387 301 aaPredicted RBP11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 GLAP06280 429 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 PPIAL4FP0DN26 164 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 GABRR1P24046 479 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 BLVRBP30043 206 aaPredicted RBP11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 ETV6P41212 452 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 TMEM33P57088 247 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 GMFBP60983 142 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 LSAMPQ13449 338 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 TMEM69Q5SWH9 247 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 TEX36Q5VZQ5 186 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 CNIH2Q6PI25 160 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 CCDC190Q86UF4 302 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 CHST4Q8NCG5 386 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 RAB1CQ92928 201 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 TIMD4Q96H15 378 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 IFT22Q9H7X7 185 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 CHODLQ9H9P2 273 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 TREM2Q9NZC2 230 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 NLKQ9UBE8 527 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 ITGB1BP2Q9UKP3 347 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 BOLA1Q9Y3E2 137 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 PPIAL4AQ9Y536 164 aa11.11□□□□□ -0.63
NDUFB11-201ENST00000276062 OOEPA6NGQ2 149 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 OR2AT4A6NND4 320 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 GEMIN2O14893 280 aaKnown RBP11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 WNT9BO14905 357 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 OR7C1O76099 320 aaPredicted RBP11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 PAX1P15863 534 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 FUT3P21217 361 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 DNASE1P24855 282 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 CDK2P24941 298 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 COL8A2P25067 703 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 MNDAP41218 407 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 PLA2G7Q13093 441 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 IKZF1Q13422 519 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 IL18Q14116 193 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 RBM39Q14498 530 aaKnown RBP11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 ZNF846Q147U1 533 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 TAF9Q16594 264 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 PIGYQ3MUY2 71 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 PYHIN1Q6K0P9 492 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 FAM131AQ6UXB0 335 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 Q6ZTK2 550 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 BATF2Q8N1L9 274 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 OR4M1Q8NGD0 313 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 RAB3CQ96E17 227 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 WDR12Q9GZL7 423 aaKnown RBP11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 DNTTIP1Q9H147 329 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 WDR13Q9H1Z4 485 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 OCEL1Q9H607 264 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 ZNF701Q9NV72 531 aaPredicted RBP11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 PLEKHJ1Q9NW61 149 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 HSF4Q9ULV5 492 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 WIPI2Q9Y4P8 454 aa11.1□□□□□ -0.63
NDUFB11-201ENST00000276062 TRAV18A0A075B6X5 111 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms