RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 SHBQ15464 509 aa15.16■□□□□ 0.02
CACNA1A-253ENST00000637927 ZNF774Q6NX45 483 aa15.16■□□□□ 0.02
CACNA1A-253ENST00000637927 MOGAT3Q86VF5 341 aa15.16■□□□□ 0.02
CACNA1A-253ENST00000637927 OIT3Q8WWZ8 545 aa15.16■□□□□ 0.02
CACNA1A-253ENST00000637927 TMEM56Q96MV1 263 aa15.16■□□□□ 0.02
CACNA1A-253ENST00000637927 C19orf53Q9UNZ5 99 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-253ENST00000637927 TOGARAM1Q9Y4F4 1720 aa15.16■□□□□ 0.02
CACNA1A-253ENST00000637927 IGLV3-10A0A075B6K4 115 aa15.16■□□□□ 0.02
CACNA1A-253ENST00000637927 DHRS7CA6NNS2 312 aa15.16■□□□□ 0.02
CACNA1A-253ENST00000637927 CD3EP07766 207 aa15.16■□□□□ 0.02
CACNA1A-253ENST00000637927 SELENBP1Q13228 472 aa15.16■□□□□ 0.02
CACNA1A-253ENST00000637927 IL11RAQ14626 422 aa15.16■□□□□ 0.02
CACNA1A-253ENST00000637927 HLXQ14774 488 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-253ENST00000637927 COL5A1-AS1Q5SY13 56 aa15.16■□□□□ 0.02
CACNA1A-253ENST00000637927 OR2V1Q8NHB1 315 aa15.16■□□□□ 0.02
CACNA1A-253ENST00000637927 SPAG8Q99932 426 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-253ENST00000637927 SCN3AQ9NY46 2000 aa15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 PRB4P10163 310 aaPredicted RBP15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 OR2D3Q8NGH3 330 aa15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 KCNE3Q9Y6H6 103 aa15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 JUNBP17275 347 aaPredicted RBP15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 ZNF117Q03924 483 aa15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 S1PR5Q9H228 398 aa15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 TMEM30CPA0ZSE6 113 aa15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 ALG1L2C9J202 215 aa15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 UPK1AO00322 258 aa15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 OR10A7Q8NGE5 316 aa15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 TAAR9Q96RI9 348 aa15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 GSX1Q9H4S2 264 aaPredicted RBP15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 TARM1B6A8C7 271 aa15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 ZNF429Q86V71 674 aa15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 ZNF547Q8IVP9 402 aa15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 CSF2RBP32927 897 aa15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 HYAL1Q12794 435 aa15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 SLC26A10Q8NG04 563 aa15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 SLC25A43Q8WUT9 341 aaPredicted RBP15.15■□□□□ 0.02
CACNA1A-253ENST00000637927 TRAV20A0A0B4J274 112 aa15.14■□□□□ 0.02
CACNA1A-253ENST00000637927 LOC107984156A0A0G2JMH3 177 aa15.14■□□□□ 0.02
CACNA1A-253ENST00000637927 MGMTP16455 207 aa15.14■□□□□ 0.02
CACNA1A-253ENST00000637927 KLF3P57682 345 aaPredicted RBP15.14■□□□□ 0.02
CACNA1A-253ENST00000637927 ZBTB37Q5TC79 503 aa15.14■□□□□ 0.02
CACNA1A-253ENST00000637927 MRPL54Q6P161 138 aaKnown RBP15.14■□□□□ 0.02
CACNA1A-253ENST00000637927 BHLHA15Q7RTS1 189 aaPredicted RBP15.14■□□□□ 0.02
CACNA1A-253ENST00000637927 ARL17AQ8IVW1 177 aa15.14■□□□□ 0.02
CACNA1A-253ENST00000637927 PELI3Q8N2H9 469 aa15.14■□□□□ 0.02
CACNA1A-253ENST00000637927 OR1K1Q8NGR3 316 aa15.14■□□□□ 0.02
CACNA1A-253ENST00000637927 SEMA7AO75326 666 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 KIR2DL1P43626 348 aaPredicted RBP15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 KIR2DL2P43627 348 aaPredicted RBP15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 GPNMBQ14956 572 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 SSX8Q7RTT4 187 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 GUCD1Q96NT3 240 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 SPNS1Q9H2V7 528 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 FBP1P09467 338 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 KRTCAP3Q53RY4 240 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 FAM27D1Q5T7N8 215 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 FAM74A4Q5TZK3 123 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 DLEU7Q6UYE1 221 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 EXTL1Q92935 676 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 TNFRSF1AP19438 455 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 GALNSP34059 522 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 FOXO1Q12778 655 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 SPANXN1Q5VSR9 72 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 NSG2Q9Y328 171 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 ITGB4P16144 1822 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 OR2A25A4D2G3 310 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 IGHV4-34P06331 123 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 CHRDL1Q9BU40 450 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 ZDHHC8Q9ULC8 765 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 GABRG2P18507 467 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 SLC25A30Q5SVS4 291 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 TNFRSF12AQ9NP84 129 aa15.14■□□□□ 0.01
CACNA1A-253ENST00000637927 OR2T8A6NH00 312 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 MASP2O00187 686 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 MPZL1O95297 269 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 CYC1P08574 325 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 DCTDP32321 178 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 DUSP8Q13202 625 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 SIGIRRQ6IA17 410 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 RBFOX1Q9NWB1 397 aaKnown RBP15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 PPM1DO15297 605 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 OTX1P32242 354 aaPredicted RBP15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 MIDNQ504T8 468 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 DYRK2Q92630 601 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 TMEM18Q96B42 140 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 SLC25A21Q9BQT8 299 aaPredicted RBP15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 HSF4Q9ULV5 492 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 GABRA6Q16445 453 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 OVCH2Q7RTZ1 564 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 ATP5SQ99766 215 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 TRDV1A0A1B0GX56 115 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 CEACAM5P06731 702 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 AVPR2P30518 371 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 OR2A2Q6IF42 318 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 C6orf201Q7Z4U5 140 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 ARIH2OSQ8N7S6 290 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 OR10D4PQ8NGN7 298 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 SPAG17Q6Q759 2223 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 PROB1E7EW31 1015 aa15.13■□□□□ 0.01
CACNA1A-253ENST00000637927 H0YIG0 161 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms