RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	POLR2J2	Q9GZM3	115 aa	Known RBP	4.14	□□□□□ -1.75
NRXN1-223	ENST00000625891	NDEL1	Q9GZM8	345 aa		4.14	□□□□□ -1.75
NRXN1-223	ENST00000625891	POLR2J3	Q9H1A7	115 aa	Known RBP	4.14	□□□□□ -1.75
NRXN1-223	ENST00000625891	TPK1	Q9H3S4	243 aa		4.14	□□□□□ -1.75
NRXN1-223	ENST00000625891	RGCC	Q9H4X1	137 aa		4.14	□□□□□ -1.75
NRXN1-223	ENST00000625891	WDR54	Q9H977	334 aa		4.14	□□□□□ -1.75
NRXN1-223	ENST00000625891	FBXO6	Q9NRD1	293 aa	Predicted RBP	4.14	□□□□□ -1.75
NRXN1-223	ENST00000625891	AGPAT4	Q9NRZ5	378 aa		4.14	□□□□□ -1.75
NRXN1-223	ENST00000625891	PRR34	Q9NV39	138 aa		4.14	□□□□□ -1.75
NRXN1-223	ENST00000625891	ARHGAP21	Q5T5U3	1957 aa		4.14	□□□□□ -1.75
NRXN1-223	ENST00000625891	ZAN	Q9Y493	2812 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	KCNE1B	A0A087WTH5	132 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891		A0A0G2JN53	185 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	MRPS12	O15235	138 aa	Known RBP	4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	EED	O75530	441 aa	Known RBP	4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	SERPINB7	O75635	380 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	PIAS1	O75925	651 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	VAPB	O95292	243 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	SERPINA7	P05543	415 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	OR56A5	P0C7T3	313 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	PSMB1	P20618	241 aa	Known RBP	4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	IMPA1	P29218	277 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	RPS5	P46782	204 aa	Known RBP	4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	RIPPLY3	P57055	190 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	ART3	Q13508	389 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	PRPSAP1	Q14558	356 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	PGGHG	Q32M88	737 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	LIN52	Q52LA3	116 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	STUM	Q69YW2	141 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	H3F3C	Q6NXT2	135 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	ZNF836	Q6ZNA1	936 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891		Q6ZSR3	168 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	LHFPL3	Q86UP9	236 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	IFT20	Q8IY31	132 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	CPNE9	Q8IYJ1	553 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	ST13P4	Q8IZP2	240 aa	Predicted RBP	4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	NKAPP1	Q8N9T2	125 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	OR10H4	Q8NGA5	316 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	OR1S2	Q8NGQ3	325 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	JSRP1	Q96MG2	331 aa	Predicted RBP	4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	ZIM3	Q96PE6	472 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	OR4K3	Q96R72	315 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	CYTH2	Q99418	400 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	SLC29A1	Q99808	456 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	ARHGDIG	Q99819	225 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	NAT9	Q9BTE0	207 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	OR51M1	Q9H341	326 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	SLC25A22	Q9H936	323 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	TMBIM4	Q9HC24	238 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	LZTFL1	Q9NQ48	299 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	STMN3	Q9NZ72	180 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	ABCD2	Q9UBJ2	740 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	ZNF282	Q9UDV7	671 aa	Predicted RBP	4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	SAR1B	Q9Y6B6	198 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	MPDZ	O75970	2070 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	NAV3	Q8IVL0	2385 aa		4.13	□□□□□ -1.75
NRXN1-223	ENST00000625891	NIN	Q8N4C6	2090 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	TRAV17	A0A0B4J275	112 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891		A0A1B0GUH1	482 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	GABRR3	A8MPY1	467 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	C12orf71	A8MTZ7	269 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	GOLGA8M	H3BSY2	632 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	PRMT5	O14744	637 aa	Predicted RBP	4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	PPP1R2P9	O14990	202 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	ZNF780A	O75290	641 aa	Predicted RBP	4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	PSIP1	O75475	530 aa	Known RBP	4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	TSPAN13	O95857	204 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	FGG	P02679	453 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	COX6B1	P14854	86 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	OR3A4P	P47883	348 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	CLDN18	P56856	261 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	NUP107	P57740	925 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	NCALD	P61601	193 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	RAB11A	P62491	216 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	RELA	Q04206	551 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	RAB11B	Q15907	218 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	FBXO48	Q5FWF7	155 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	LY6G6F	Q5SQ64	297 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	PTRHD1	Q6GMV3	140 aa	Known RBP	4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	C1orf94	Q6P1W5	598 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	DGAT2L6	Q6ZPD8	337 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	FAM220A	Q7Z4H9	259 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	TMEM179B	Q7Z7N9	219 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	SPATA24	Q86W54	205 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	SLC13A5	Q86YT5	568 aa	Predicted RBP	4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	SPAG16	Q8N0X2	631 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	C6orf223	Q8N319	242 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	RNF175	Q8N4F7	328 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	JAGN1	Q8N5M9	183 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	PRELID2	Q8N945	189 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	DNAAF3	Q8N9W5	541 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	TTC29	Q8NA56	475 aa	Predicted RBP	4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	BBS1	Q8NFJ9	593 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	OR51Q1	Q8NH59	317 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	SKA2	Q8WVK7	121 aa	Predicted RBP	4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	ASZ1	Q8WWH4	475 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	CDKL2	Q92772	493 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	UCN3	Q969E3	161 aa		4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	DGCR14	Q96DF8	476 aa	Known RBP	4.12	□□□□□ -1.75
NRXN1-223	ENST00000625891	IP6K3	Q96PC2	410 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms