RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 NCOA6Q14686 2063 aaPredicted RBP15.17■□□□□ 0.02
ARHGEF1-213ENST00000595897 GPR37O15354 613 aa15.17■□□□□ 0.02
ARHGEF1-213ENST00000595897 RD3LP0DJH9 198 aa15.17■□□□□ 0.02
ARHGEF1-213ENST00000595897 RAB2AP61019 212 aa15.17■□□□□ 0.02
ARHGEF1-213ENST00000595897 LSM6P62312 80 aaKnown RBP15.17■□□□□ 0.02
ARHGEF1-213ENST00000595897 EIF3IQ13347 325 aaKnown RBP15.17■□□□□ 0.02
ARHGEF1-213ENST00000595897 CLINT1Q14677 625 aa15.17■□□□□ 0.02
ARHGEF1-213ENST00000595897 HIST2H3AQ71DI3 136 aa15.17■□□□□ 0.02
ARHGEF1-213ENST00000595897 DYRK2Q92630 601 aa15.17■□□□□ 0.02
ARHGEF1-213ENST00000595897 SLAMF9Q96A28 289 aa15.17■□□□□ 0.02
ARHGEF1-213ENST00000595897 RARRES2Q99969 163 aa15.17■□□□□ 0.02
ARHGEF1-213ENST00000595897 SUCNR1Q9BXA5 334 aa15.17■□□□□ 0.02
ARHGEF1-213ENST00000595897 NELFAQ9H3P2 528 aa15.17■□□□□ 0.02
ARHGEF1-213ENST00000595897 ZNF581Q9P0T4 197 aa15.17■□□□□ 0.02
ARHGEF1-213ENST00000595897 PHF1O43189 567 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF1-213ENST00000595897 CTSSP25774 331 aa15.16■□□□□ 0.02
ARHGEF1-213ENST00000595897 RAB1AP62820 205 aa15.16■□□□□ 0.02
ARHGEF1-213ENST00000595897 MEX3BQ6ZN04 569 aaKnown RBP15.16■□□□□ 0.02
ARHGEF1-213ENST00000595897 LIAT1Q6ZQX7 453 aa15.16■□□□□ 0.02
ARHGEF1-213ENST00000595897 LFNGQ8NES3 379 aa15.16■□□□□ 0.02
ARHGEF1-213ENST00000595897 GALNT14Q96FL9 552 aa15.16■□□□□ 0.02
ARHGEF1-213ENST00000595897 CHRDQ9H2X0 955 aa15.16■□□□□ 0.02
ARHGEF1-213ENST00000595897 AQP7P3A6NL99 342 aa15.16■□□□□ 0.02
ARHGEF1-213ENST00000595897 NR2C1P13056 603 aa15.16■□□□□ 0.02
ARHGEF1-213ENST00000595897 IL13RA2Q14627 380 aa15.16■□□□□ 0.02
ARHGEF1-213ENST00000595897 LGI3Q8N145 548 aa15.16■□□□□ 0.02
ARHGEF1-213ENST00000595897 SYT3Q9BQG1 590 aa15.16■□□□□ 0.02
ARHGEF1-213ENST00000595897 TINAGQ9UJW2 476 aa15.16■□□□□ 0.02
ARHGEF1-213ENST00000595897 RCL1Q9Y2P8 373 aaKnown RBP15.16■□□□□ 0.02
ARHGEF1-213ENST00000595897 KIAA0141Q14154 515 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 PRAMEF20Q5VT98 475 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 SLC22A25Q6T423 547 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 WDSUB1Q8N9V3 476 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 BCL2L14Q9BZR8 327 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 MYOTQ9UBF9 498 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 COL5A1P20908 1838 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 H7C1Q1 480 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 IGLV3-1P01715 115 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 AFF3P51826 1226 aaKnown RBP15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 PRSS12P56730 875 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 RPS23P62266 143 aaKnown RBP15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 OR11L1Q8NGX0 322 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 MALSU1Q96EH3 234 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 TOLLIPQ9H0E2 274 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 MMP24Q9Y5R2 645 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 ADAMTS9Q9P2N4 1935 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 MSTNO14793 375 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 PTGDSP41222 190 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 STARD6P59095 220 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 ZNF239Q16600 458 aaKnown RBP15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 NKAIN1Q4KMZ8 207 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 CARFQ8N187 725 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 OR2M3Q8NG83 312 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 OR2AE1Q8NHA4 323 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 EDARADDQ8WWZ3 215 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 WDR77Q9BQA1 342 aaPredicted RBP15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 ZDHHC8Q9ULC8 765 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 HDGFL3Q9Y3E1 203 aa15.15■□□□□ 0.02
ARHGEF1-213ENST00000595897 PRUNE2Q8WUY3 3088 aa15.14■□□□□ 0.01
ARHGEF1-213ENST00000595897 YIF1AO95070 293 aa15.14■□□□□ 0.01
ARHGEF1-213ENST00000595897 IGHV2-70P01814 119 aa15.14■□□□□ 0.01
ARHGEF1-213ENST00000595897 OMGP23515 440 aa15.14■□□□□ 0.01
ARHGEF1-213ENST00000595897 SNAI3Q3KNW1 292 aa15.14■□□□□ 0.01
ARHGEF1-213ENST00000595897 OR2G3Q8NGZ4 309 aa15.14■□□□□ 0.01
ARHGEF1-213ENST00000595897 SPTSSAQ969W0 71 aa15.14■□□□□ 0.01
ARHGEF1-213ENST00000595897 MARS2Q96GW9 593 aaKnown RBP15.14■□□□□ 0.01
ARHGEF1-213ENST00000595897 TGIF2Q9GZN2 237 aa15.14■□□□□ 0.01
ARHGEF1-213ENST00000595897 ZNF700Q9H0M5 742 aa15.14■□□□□ 0.01
ARHGEF1-213ENST00000595897 CCDC187A0A096LP49 1063 aa15.14■□□□□ 0.01
ARHGEF1-213ENST00000595897 IGHV3-15A0A0B4J1V0 119 aa15.14■□□□□ 0.01
ARHGEF1-213ENST00000595897 SHISA7A6NL88 538 aa15.14■□□□□ 0.01
ARHGEF1-213ENST00000595897 ZFAND5O76080 213 aa15.14■□□□□ 0.01
ARHGEF1-213ENST00000595897 ENDOGQ14249 297 aaKnown RBP15.14■□□□□ 0.01
ARHGEF1-213ENST00000595897 CDCP2Q5VXM1 449 aa15.14■□□□□ 0.01
ARHGEF1-213ENST00000595897 RHBDD2Q6NTF9 364 aa15.14■□□□□ 0.01
ARHGEF1-213ENST00000595897 ZFP62Q8NB50 900 aaPredicted RBP15.14■□□□□ 0.01
ARHGEF1-213ENST00000595897 PHYHD1Q5SRE7 291 aa15.13■□□□□ 0.01
ARHGEF1-213ENST00000595897 SUMF1Q8NBK3 374 aa15.13■□□□□ 0.01
ARHGEF1-213ENST00000595897 HPSE2Q8WWQ2 592 aa15.13■□□□□ 0.01
ARHGEF1-213ENST00000595897 C18orf12Q96KH6 178 aa15.13■□□□□ 0.01
ARHGEF1-213ENST00000595897 GGACTQ9BVM4 153 aa15.13■□□□□ 0.01
ARHGEF1-213ENST00000595897 CDRT15L2A8MXV6 281 aa15.13■□□□□ 0.01
ARHGEF1-213ENST00000595897 DTYMKP23919 212 aa15.13■□□□□ 0.01
ARHGEF1-213ENST00000595897 HERV-K104P61576 105 aa15.13■□□□□ 0.01
ARHGEF1-213ENST00000595897 EWSR1Q01844 656 aaKnown RBP eCLIP15.13■□□□□ 0.01
ARHGEF1-213ENST00000595897 RSPO1Q2MKA7 263 aaPredicted RBP15.13■□□□□ 0.01
ARHGEF1-213ENST00000595897 CPEB2Q7Z5Q1 589 aaKnown RBP15.13■□□□□ 0.01
ARHGEF1-213ENST00000595897 SNIP1Q8TAD8 396 aaKnown RBP15.13■□□□□ 0.01
ARHGEF1-213ENST00000595897 MSI2Q96DH6 328 aaKnown RBP15.13■□□□□ 0.01
ARHGEF1-213ENST00000595897 RFNGQ9Y644 331 aa15.13■□□□□ 0.01
ARHGEF1-213ENST00000595897 CCDC85CA6NKD9 419 aa15.12■□□□□ 0.01
ARHGEF1-213ENST00000595897 NPIPA2E9PIF3 369 aa15.12■□□□□ 0.01
ARHGEF1-213ENST00000595897 NPIPA3F8WFD2 350 aa15.12■□□□□ 0.01
ARHGEF1-213ENST00000595897 GEMIN2O14893 280 aaKnown RBP15.12■□□□□ 0.01
ARHGEF1-213ENST00000595897 SYT13Q7L8C5 426 aa15.12■□□□□ 0.01
ARHGEF1-213ENST00000595897 SLC35G3Q8N808 338 aa15.12■□□□□ 0.01
ARHGEF1-213ENST00000595897 ZNF385AQ96PM9 386 aaKnown RBP15.12■□□□□ 0.01
ARHGEF1-213ENST00000595897 SHANK1Q9Y566 2161 aa15.12■□□□□ 0.01
ARHGEF1-213ENST00000595897 FAM24AA6NFZ4 105 aa15.12■□□□□ 0.01
ARHGEF1-213ENST00000595897 K7N7A8 449 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms