RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 POLDIP2Q9Y2S7 368 aa13.97□□□□□ -0.17
RETREG3-210ENST00000590541 METTL15A6NJ78 407 aa13.96□□□□□ -0.17
RETREG3-210ENST00000590541 SAC3D1A6NKF1 404 aa13.96□□□□□ -0.17
RETREG3-210ENST00000590541 VGLL3A8MV65 326 aa13.96□□□□□ -0.17
RETREG3-210ENST00000590541 NOS1APO75052 506 aaPredicted RBP13.96□□□□□ -0.17
RETREG3-210ENST00000590541 ALPLP05186 524 aa13.96□□□□□ -0.17
RETREG3-210ENST00000590541 CCL1P22362 96 aa13.96□□□□□ -0.17
RETREG3-210ENST00000590541 POLR2IP36954 125 aaKnown RBP13.96□□□□□ -0.17
RETREG3-210ENST00000590541 RAB13P51153 203 aa13.96□□□□□ -0.17
RETREG3-210ENST00000590541 SLC35A2P78381 396 aa13.96□□□□□ -0.17
RETREG3-210ENST00000590541 CD83Q01151 205 aa13.96□□□□□ -0.17
RETREG3-210ENST00000590541 CNN3Q15417 329 aaKnown RBP13.96□□□□□ -0.17
RETREG3-210ENST00000590541 SMIM21Q3B7S5 101 aa13.96□□□□□ -0.17
RETREG3-210ENST00000590541 SLC25A30Q5SVS4 291 aa13.96□□□□□ -0.17
RETREG3-210ENST00000590541 HAGHLQ6PII5 290 aaPredicted RBP13.96□□□□□ -0.17
RETREG3-210ENST00000590541 DYNAPQ8N1N2 210 aa13.96□□□□□ -0.17
RETREG3-210ENST00000590541 HRASLS5Q96KN8 279 aa13.96□□□□□ -0.17
RETREG3-210ENST00000590541 USE1Q9NZ43 259 aa13.96□□□□□ -0.17
RETREG3-210ENST00000590541 EPPK1P58107 5090 aaKnown RBP13.96□□□□□ -0.17
RETREG3-210ENST00000590541 RYR2Q92736 4967 aa13.96□□□□□ -0.18
RETREG3-210ENST00000590541 A0A1B0GTI1 187 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 A0A1W2PQL4 384 aaPredicted RBP13.95□□□□□ -0.18
RETREG3-210ENST00000590541 SNTNA6NMZ2 147 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 J3QT63 122 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 RHBDL1O75783 438 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 EGFEM1PQ0D2K5 195 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 TMEM95Q3KNT9 176 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 MEDAGQ5VYS4 303 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 KCTD20Q7Z5Y7 419 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 LHFPL4Q7Z7J7 247 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 CATSPERDQ86XM0 798 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 TMEM219Q86XT9 240 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 FAM185AQ8N0U4 392 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 C11orf42Q8N5U0 333 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 POC1AQ8NBT0 407 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 ZNRF1Q8ND25 227 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 OR14K1Q8NGZ2 314 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 EME1Q96AY2 570 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 C10orf35Q96D05 121 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 SDSLQ96GA7 329 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 RCC1LQ96I51 464 aaKnown RBP13.95□□□□□ -0.18
RETREG3-210ENST00000590541 MYCBPQ99417 103 aaPredicted RBP13.95□□□□□ -0.18
RETREG3-210ENST00000590541 PRSS22Q9GZN4 317 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 SLC22A13Q9Y226 551 aa13.95□□□□□ -0.18
RETREG3-210ENST00000590541 TRBV23-1A0A0A0MS06 115 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 A6NDX4 124 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 FAM90A8PA6NJQ4 464 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 MAGEB4O15481 346 aaPredicted RBP13.94□□□□□ -0.18
RETREG3-210ENST00000590541 PEX14O75381 377 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 RPP14O95059 124 aaKnown RBP13.94□□□□□ -0.18
RETREG3-210ENST00000590541 PF4V1P10720 104 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 PSG2P11465 335 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 HAAOP46952 286 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 GABRA2P47869 451 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 ALDH3A2P51648 485 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 SNRPGP62308 76 aaKnown RBP13.94□□□□□ -0.18
RETREG3-210ENST00000590541 ACTC1P68032 377 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 ACTA1P68133 377 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 COL10A1Q03692 680 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 KPNB1Q14974 876 aaKnown RBP13.94□□□□□ -0.18
RETREG3-210ENST00000590541 PLA1AQ53H76 456 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 ACP7Q6ZNF0 438 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 SSX6Q7RTT6 188 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 FAM220AQ7Z4H9 259 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 OR10H4Q8NGA5 316 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 TBX5Q99593 518 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 ADI1Q9BV57 179 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 HEXA-AS1Q9H8Q6 139 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 PLEKHA1Q9HB21 404 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 C19orf12Q9NSK7 152 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 BIRC6Q9NR09 4857 aa13.94□□□□□ -0.18
RETREG3-210ENST00000590541 IGKV1D-17A0A075B6S4 117 aa13.93□□□□□ -0.18
RETREG3-210ENST00000590541 PQLC2LA1A4F0 135 aa13.93□□□□□ -0.18
RETREG3-210ENST00000590541 SYT7O43581 403 aa13.93□□□□□ -0.18
RETREG3-210ENST00000590541 PGA5P0DJD9 388 aa13.93□□□□□ -0.18
RETREG3-210ENST00000590541 MPZP25189 248 aa13.93□□□□□ -0.18
RETREG3-210ENST00000590541 HOXD3P31249 432 aaPredicted RBP13.93□□□□□ -0.18
RETREG3-210ENST00000590541 ERVFRD-1P60508 538 aa13.93□□□□□ -0.18
RETREG3-210ENST00000590541 BLCAPP62952 87 aa13.93□□□□□ -0.18
RETREG3-210ENST00000590541 EGFL6Q8IUX8 553 aa13.93□□□□□ -0.18
RETREG3-210ENST00000590541 ZNF561Q8N587 486 aa13.93□□□□□ -0.18
RETREG3-210ENST00000590541 TMEM185AQ8NFB2 350 aa13.93□□□□□ -0.18
RETREG3-210ENST00000590541 OR5AU1Q8NGC0 362 aa13.93□□□□□ -0.18
RETREG3-210ENST00000590541 PKIBQ9C010 78 aa13.93□□□□□ -0.18
RETREG3-210ENST00000590541 ZNF222Q9UK12 451 aa13.93□□□□□ -0.18
RETREG3-210ENST00000590541 SLC7A11Q9UPY5 501 aa13.93□□□□□ -0.18
RETREG3-210ENST00000590541 A0A1W2PPH5 198 aa13.92□□□□□ -0.18
RETREG3-210ENST00000590541 H3BNX3 289 aa13.92□□□□□ -0.18
RETREG3-210ENST00000590541 SLC1A7O00341 560 aa13.92□□□□□ -0.18
RETREG3-210ENST00000590541 EI24O14681 340 aa13.92□□□□□ -0.18
RETREG3-210ENST00000590541 GATBO75879 557 aaKnown RBP13.92□□□□□ -0.18
RETREG3-210ENST00000590541 DUS4LO95620 317 aaKnown RBP13.92□□□□□ -0.18
RETREG3-210ENST00000590541 SERPINA3P01011 423 aa13.92□□□□□ -0.18
RETREG3-210ENST00000590541 PF4P02776 101 aa13.92□□□□□ -0.18
RETREG3-210ENST00000590541 UBCP0CG48 685 aaKnown RBP13.92□□□□□ -0.18
RETREG3-210ENST00000590541 COX7A1P24310 79 aa13.92□□□□□ -0.18
RETREG3-210ENST00000590541 LGALS4P56470 323 aa13.92□□□□□ -0.18
RETREG3-210ENST00000590541 ISL1P61371 349 aa13.92□□□□□ -0.18
RETREG3-210ENST00000590541 IL24Q13007 206 aa13.92□□□□□ -0.18
RETREG3-210ENST00000590541 TCTEX1D4Q5JR98 221 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms