RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 SOX2P48431 317 aa12.67□□□□□ -0.38
CCNDBP1-203ENST00000562553 MTCP1P56278 107 aa12.67□□□□□ -0.38
CCNDBP1-203ENST00000562553 CAV3P56539 151 aa12.67□□□□□ -0.38
CCNDBP1-203ENST00000562553 MED21Q13503 144 aa12.67□□□□□ -0.38
CCNDBP1-203ENST00000562553 METTL11BQ5VVY1 283 aa12.67□□□□□ -0.38
CCNDBP1-203ENST00000562553 RUSC1-AS1Q66K80 236 aa12.67□□□□□ -0.38
CCNDBP1-203ENST00000562553 BRD3OSQ6XYD6 125 aa12.67□□□□□ -0.38
CCNDBP1-203ENST00000562553 PARP16Q8N5Y8 322 aa12.67□□□□□ -0.38
CCNDBP1-203ENST00000562553 SIGLECL1Q8N7X8 197 aa12.67□□□□□ -0.38
CCNDBP1-203ENST00000562553 ZFP41Q8N8Y5 198 aa12.67□□□□□ -0.38
CCNDBP1-203ENST00000562553 OR13C5Q8NGS8 318 aa12.67□□□□□ -0.38
CCNDBP1-203ENST00000562553 MS4A7Q9GZW8 240 aaPredicted RBP12.67□□□□□ -0.38
CCNDBP1-203ENST00000562553 RBFOX1Q9NWB1 397 aaKnown RBP12.67□□□□□ -0.38
CCNDBP1-203ENST00000562553 CHCHD3Q9NX63 227 aaKnown RBP12.67□□□□□ -0.38
CCNDBP1-203ENST00000562553 ONECUT1Q9UBC0 465 aa12.67□□□□□ -0.38
CCNDBP1-203ENST00000562553 ANK2Q01484 3957 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 IGKV1-12A0A0C4DH73 117 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 MDFIC2A0A1B0GVS7 189 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 ANGPTL7O43827 346 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 KNG1P01042 644 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 IGKV1D-12P01611 117 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 OCM2P0CE71 109 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 OCMP0CE72 109 aaPredicted RBP12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 BCL3P20749 454 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 CAPZA1P52907 286 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 DLX1P56177 255 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 PRB3Q04118 309 aaPredicted RBP12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 C9orf139Q6ZV77 190 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 STX19Q8N4C7 294 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 ZNF561Q8N587 486 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 ZDHHC22Q8N966 263 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 OR51A2Q8NGJ7 313 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 OR5D18Q8NGL1 313 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 SGCDQ92629 289 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 SMIM19Q96E16 107 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 KPTNQ9Y664 436 aa12.66□□□□□ -0.38
CCNDBP1-203ENST00000562553 CENPVL3A0A0U1RRI6 287 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 SLC1A7O00341 560 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 SULT1B1O43704 296 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 RPSAP08865 295 aaKnown RBP12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 CALCBP10092 127 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 PDZK1IP1Q13113 114 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 C6orf141Q5SZD1 244 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 GPR157Q5UAW9 335 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 DMKNQ6E0U4 476 aaPredicted RBP12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 IZUMO2Q6UXV1 221 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 VMO1Q7Z5L0 202 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 SERPINA12Q8IW75 414 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 PDZD9Q8IXQ8 264 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 MKXQ8IYA7 352 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 Q8N7P7 452 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 OR5D14Q8NGL3 314 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 GPR148Q8TDV2 347 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 EMG1Q92979 244 aaKnown RBP12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 LHX4Q969G2 390 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 ORAI1Q96D31 301 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 PGLYRP3Q96LB9 341 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 SIRT7Q9NRC8 400 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 C19orf12Q9NSK7 152 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 PAK1IP1Q9NWT1 392 aaPredicted RBP12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 TAS2R4Q9NYW5 299 aa12.65□□□□□ -0.38
CCNDBP1-203ENST00000562553 NBEAL1Q6ZS30 2694 aa12.64□□□□□ -0.39
CCNDBP1-203ENST00000562553 PNMA8CA0A1B0GUJ8 204 aa12.64□□□□□ -0.39
CCNDBP1-203ENST00000562553 A0A1W2PQ09 198 aa12.64□□□□□ -0.39
CCNDBP1-203ENST00000562553 ATP6V1G2O95670 118 aa12.64□□□□□ -0.39
CCNDBP1-203ENST00000562553 HCKP08631 526 aa12.64□□□□□ -0.39
CCNDBP1-203ENST00000562553 MYF6P23409 242 aa12.64□□□□□ -0.39
CCNDBP1-203ENST00000562553 SNU13P55769 128 aaKnown RBP12.64□□□□□ -0.39
CCNDBP1-203ENST00000562553 ZP1P60852 638 aa12.64□□□□□ -0.39
CCNDBP1-203ENST00000562553 COL10A1Q03692 680 aa12.64□□□□□ -0.39
CCNDBP1-203ENST00000562553 ZNF529Q6P280 563 aa12.64□□□□□ -0.39
CCNDBP1-203ENST00000562553 FAM185AQ8N0U4 392 aa12.64□□□□□ -0.39
CCNDBP1-203ENST00000562553 KIR3DL3Q8N743 410 aa12.64□□□□□ -0.39
CCNDBP1-203ENST00000562553 GHSRQ92847 366 aa12.64□□□□□ -0.39
CCNDBP1-203ENST00000562553 C1orf147Q96MC9 270 aaPredicted RBP12.64□□□□□ -0.39
CCNDBP1-203ENST00000562553 NKX3-1Q99801 234 aaPredicted RBP12.64□□□□□ -0.39
CCNDBP1-203ENST00000562553 ZNF281Q9Y2X9 895 aa12.64□□□□□ -0.39
CCNDBP1-203ENST00000562553 TRBV23-1A0A0A0MS06 115 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 TRBV5-5A0A0J9YX44 114 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 PTGES3LE9PB15 166 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 MYL12BO14950 172 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 ZNF737O75373 536 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 ALX3O95076 343 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 CYB5AP00167 134 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 TK1P04183 234 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 CDK1P06493 297 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 PRKACAP17612 351 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 DUSP1P28562 367 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 WNT4P56705 351 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 RPS11P62280 158 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 KLRD1Q13241 179 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 PDCD1Q15116 288 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 KISS1Q15726 138 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 DEFB112Q30KQ8 113 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 Q8IYB0 196 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 FAM58AQ8N1B3 248 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 NANOGP1Q8N7R0 232 aa12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 ASCC1Q8N9N2 400 aaKnown RBP12.63□□□□□ -0.39
CCNDBP1-203ENST00000562553 OR4M1Q8NGD0 313 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms