RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 ATP1B3P54709 279 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 EDDM3BP56851 147 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 ERVK11-1P61568 191 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 ACTC1P68032 377 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 ACTA1P68133 377 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 GUCA2AQ02747 115 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 IL24Q13007 206 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 ALKBH1Q13686 389 aaKnown RBP10.22□□□□□ -0.77
SMAD3-208ENST00000558827 PLA1AQ53H76 456 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 SLC25A30Q5SVS4 291 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 LPCAT4Q643R3 524 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 SHISA2Q6UWI4 295 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 C10orf67Q8IYJ2 551 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 ZNF561Q8N587 486 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 OR52I1Q8NGK6 324 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 OR13C3Q8NGS6 347 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 OR13C9Q8NGT0 318 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 ITFG2Q969R8 447 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 NKX3-1Q99801 234 aaPredicted RBP10.22□□□□□ -0.77
SMAD3-208ENST00000558827 METTL8Q9H825 291 aaKnown RBP10.22□□□□□ -0.77
SMAD3-208ENST00000558827 HES4Q9HCC6 221 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 ING3Q9NXR8 418 aa10.22□□□□□ -0.77
SMAD3-208ENST00000558827 TRBV23-1A0A0A0MS06 115 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 SNTNA6NMZ2 147 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 OR4C45A6NMZ5 311 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 SIRPB1O00241 398 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 KNG1P01042 644 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 PRKACAP17612 351 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 UBE2E1P51965 193 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 GTF2A1P52655 376 aaPredicted RBP10.21□□□□□ -0.77
SMAD3-208ENST00000558827 KRTAP10-3P60369 221 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 SCN1BQ07699 218 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 CNN3Q15417 329 aaKnown RBP10.21□□□□□ -0.77
SMAD3-208ENST00000558827 HIST2H2BDQ6DRA6 164 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 LDLRAD3Q86YD5 345 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 TMEM86BQ8N661 226 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 OR52N4Q8NGI2 321 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 OR4F5Q8NH21 305 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 CNIH3Q8TBE1 160 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 APH1BQ8WW43 257 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 PDCD1LG2Q9BQ51 273 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 BEX1Q9HBH7 125 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 NEK6Q9HC98 313 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 ERVK13-1Q9NX77 482 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 ZNRD1Q9P1U0 126 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 HHLA2Q9UM44 414 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 SF3B6Q9Y3B4 125 aaKnown RBP10.21□□□□□ -0.77
SMAD3-208ENST00000558827 POMT1Q9Y6A1 747 aa10.21□□□□□ -0.77
SMAD3-208ENST00000558827 TRRAPQ9Y4A5 3859 aa10.21□□□□□ -0.78
SMAD3-208ENST00000558827 IGKV1-12A0A0C4DH73 117 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 H3BUX3 64 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 K7N7A8 449 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 HAND1O96004 215 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 IGKV1D-12P01611 117 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 CHRM2P08172 466 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 GABRR1P24046 479 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 SOX2P48431 317 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 RBP2P50120 134 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 GALEQ14376 348 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 OLFML2AQ68BL7 652 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 NCR3LG1Q68D85 454 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 FDX2Q6P4F2 183 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 METAP1DQ6UB28 335 aaPredicted RBP10.2□□□□□ -0.78
SMAD3-208ENST00000558827 C1orf122Q6ZSJ8 110 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 GDPD3Q7L5L3 318 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 KCTD20Q7Z5Y7 419 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 LHFPL4Q7Z7J7 247 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 C11orf42Q8N5U0 333 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 ZNF555Q8NEP9 628 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 OR5D13Q8NGL4 314 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 SGMS2Q8NHU3 365 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 CYGBQ8WWM9 190 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 DYRK2Q92630 601 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 STMN2Q93045 179 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 Q96MT0 163 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 OPALINQ96PE5 141 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 ZNF649Q9BS31 505 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 PPA2Q9H2U2 334 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 DPAGT1Q9H3H5 408 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 WNK1Q9H4A3 2382 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 GSTK1Q9Y2Q3 226 aa10.2□□□□□ -0.78
SMAD3-208ENST00000558827 CAB39Q9Y376 341 aaPredicted RBP10.2□□□□□ -0.78
SMAD3-208ENST00000558827 CLPSL1A2RUU4 121 aa10.19□□□□□ -0.78
SMAD3-208ENST00000558827 BTBD17A6NE02 478 aa10.19□□□□□ -0.78
SMAD3-208ENST00000558827 POM121CA8CG34 1229 aa10.19□□□□□ -0.78
SMAD3-208ENST00000558827 ZNF737O75373 536 aa10.19□□□□□ -0.78
SMAD3-208ENST00000558827 WBP4O75554 376 aaKnown RBP10.19□□□□□ -0.78
SMAD3-208ENST00000558827 FADS2O95864 444 aaKnown RBP10.19□□□□□ -0.78
SMAD3-208ENST00000558827 PRKACBP22694 351 aa10.19□□□□□ -0.78
SMAD3-208ENST00000558827 RAB13P51153 203 aa10.19□□□□□ -0.78
SMAD3-208ENST00000558827 DHRS7BQ6IAN0 325 aaPredicted RBP10.19□□□□□ -0.78
SMAD3-208ENST00000558827 C17orf107Q6ZR85 190 aa10.19□□□□□ -0.78
SMAD3-208ENST00000558827 Q6ZSV7 163 aa10.19□□□□□ -0.78
SMAD3-208ENST00000558827 FAM58AQ8N1B3 248 aa10.19□□□□□ -0.78
SMAD3-208ENST00000558827 CCDC54Q8NEL0 328 aa10.19□□□□□ -0.78
SMAD3-208ENST00000558827 OR4S1Q8NGB4 309 aa10.19□□□□□ -0.78
SMAD3-208ENST00000558827 TSEN15Q8WW01 171 aaKnown RBP10.19□□□□□ -0.78
SMAD3-208ENST00000558827 PP6455Q8WZ26 134 aa10.19□□□□□ -0.78
SMAD3-208ENST00000558827 AJUBAQ96IF1 538 aa10.19□□□□□ -0.78
SMAD3-208ENST00000558827 SSX3Q99909 188 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms