RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 KIAA0040Q15053 153 aa10.58□□□□□ -0.72
NEK9-210ENST00000557026 FCN2Q15485 313 aa10.58□□□□□ -0.72
NEK9-210ENST00000557026 FAM209BQ5JX69 171 aa10.58□□□□□ -0.72
NEK9-210ENST00000557026 CHST2Q9Y4C5 530 aa10.58□□□□□ -0.72
NEK9-210ENST00000557026 DUS4LO95620 317 aaKnown RBP10.58□□□□□ -0.72
NEK9-210ENST00000557026 RPL13AP40429 203 aaKnown RBP10.58□□□□□ -0.72
NEK9-210ENST00000557026 OR3A4PP47883 348 aa10.58□□□□□ -0.72
NEK9-210ENST00000557026 ZNF260Q3ZCT1 412 aa10.58□□□□□ -0.72
NEK9-210ENST00000557026 INSIG2Q9Y5U4 225 aa10.58□□□□□ -0.72
NEK9-210ENST00000557026 A6NIN4 97 aa10.58□□□□□ -0.72
NEK9-210ENST00000557026 CYR61O00622 381 aa10.58□□□□□ -0.72
NEK9-210ENST00000557026 MBPP02686 304 aaPredicted RBP10.58□□□□□ -0.72
NEK9-210ENST00000557026 CD1AP06126 327 aa10.58□□□□□ -0.72
NEK9-210ENST00000557026 SPNS3Q6ZMD2 512 aa10.58□□□□□ -0.72
NEK9-210ENST00000557026 BAP18Q8IXM2 172 aa10.58□□□□□ -0.72
NEK9-210ENST00000557026 OR8U1Q8NH10 309 aa10.58□□□□□ -0.72
NEK9-210ENST00000557026 NUDT8Q8WV74 236 aa10.58□□□□□ -0.72
NEK9-210ENST00000557026 OCEL1Q9H607 264 aa10.58□□□□□ -0.72
NEK9-210ENST00000557026 RNF115Q9Y4L5 304 aa10.58□□□□□ -0.72
NEK9-210ENST00000557026 NUPL2O15504 423 aaKnown RBP10.57□□□□□ -0.72
NEK9-210ENST00000557026 SMPD2O60906 423 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 ADAM11O75078 769 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 EML2O95834 649 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 HAND1O96004 215 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 ATP5IP56385 69 aaPredicted RBP10.57□□□□□ -0.72
NEK9-210ENST00000557026 RIPPLY2Q5TAB7 128 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 LAMTOR1Q6IAA8 161 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 OR4A4PQ8NGN8 299 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 ACY3Q96HD9 319 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 CTDSP1Q9GZU7 261 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 ZNF831Q5JPB2 1677 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 TNFSF12O43508 249 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 CTSDP07339 412 aaPredicted RBP10.57□□□□□ -0.72
NEK9-210ENST00000557026 MYF5P13349 255 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 VDAC1P21796 283 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 PCBP3P57721 371 aaKnown RBP10.57□□□□□ -0.72
NEK9-210ENST00000557026 GPNMBQ14956 572 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 ANKRD34AQ69YU3 496 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 NUDCD2Q8WVJ2 157 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 ZNF586Q9NXT0 402 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 PSG11Q9UQ72 335 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 MGST3O14880 152 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 FCGR3BO75015 233 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 CBR1P16152 277 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 COX7A1P24310 79 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 CDAP32320 146 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 MAGEB1P43366 347 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 IL24Q13007 206 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 AVPI1Q5T686 147 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 OLIG3Q7RTU3 272 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 TUSC5Q8IXB3 177 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 PTX4Q96A99 478 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 GNG7O60262 68 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 GAPDHP04406 335 aaKnown RBP10.57□□□□□ -0.72
NEK9-210ENST00000557026 TMEM11P17152 192 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 WDR38Q5JTN6 314 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 LYRM7Q5U5X0 104 aa10.57□□□□□ -0.72
NEK9-210ENST00000557026 HSD17B13Q7Z5P4 300 aaPredicted RBP10.57□□□□□ -0.72
NEK9-210ENST00000557026 ZMAT3Q9HA38 289 aaKnown RBP10.57□□□□□ -0.72
NEK9-210ENST00000557026 MOSPD3O75425 235 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 CD37P11049 281 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 PAX5Q02548 391 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 GUCA2AQ02747 115 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 RNFT1Q5M7Z0 435 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 FAM27BQ5VT28 67 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 OR1L8Q8NGR8 309 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 FLYWCH2Q96CP2 140 aaKnown RBP10.56□□□□□ -0.72
NEK9-210ENST00000557026 FBXL17Q9UF56 701 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 IGHV1-45A0A0A0MS14 117 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 RAB5AP20339 215 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 FAM122CQ6P4D5 195 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 TMEM182Q6ZP80 229 aaPredicted RBP10.56□□□□□ -0.72
NEK9-210ENST00000557026 SH2D5Q6ZV89 423 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 NAA60Q9H7X0 242 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 FAM60AQ9NP50 221 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 TECRQ9NZ01 308 aaKnown RBP10.56□□□□□ -0.72
NEK9-210ENST00000557026 KIAA1551Q9HCM1 1747 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 TRIM77I1YAP6 450 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 FXYD1O00168 92 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 CDC14BO60729 498 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 NQO2P16083 231 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 ASB1Q9Y576 335 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 J3QR89 54 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 SLC31A2O15432 143 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 SPRY1O43609 319 aaPredicted RBP10.56□□□□□ -0.72
NEK9-210ENST00000557026 ACSM4P0C7M7 580 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 OR13C7P0DN81 318 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 WNT3P56703 355 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 RPUSD3Q6P087 351 aaKnown RBP10.56□□□□□ -0.72
NEK9-210ENST00000557026 ETV3LQ6ZN32 361 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 OR5AP2Q8NGF4 316 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 OR4D10Q8NGI6 311 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 NEU4Q8WWR8 484 aaPredicted RBP10.56□□□□□ -0.72
NEK9-210ENST00000557026 GSX2Q9BZM3 304 aa10.56□□□□□ -0.72
NEK9-210ENST00000557026 DHRS7CA6NNS2 312 aa10.55□□□□□ -0.72
NEK9-210ENST00000557026 B9A039 149 aa10.55□□□□□ -0.72
NEK9-210ENST00000557026 CLEC2LP0C7M8 214 aa10.55□□□□□ -0.72
NEK9-210ENST00000557026 CLDN20P56880 219 aa10.55□□□□□ -0.72
NEK9-210ENST00000557026 ZNF816Q0VGE8 651 aaPredicted RBP10.55□□□□□ -0.72
NEK9-210ENST00000557026 SCN9AQ15858 1988 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms