RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 LIME1Q9H400 295 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 PCDHB16Q9NRJ7 776 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 ANXA10Q9UJ72 324 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 TCFL5Q9UL49 500 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 DOCK11Q5JSL3 2073 aa11.89□□□□□ -0.51
PRPF40B-209ENST00000548825 H7C2Y5 167 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 HSD17B6O14756 317 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 CD63P08962 238 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 CBR1P16152 277 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 GNRHRP30968 328 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 THBS4P35443 961 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 TSC22D1Q15714 1073 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 ATP1A1-AS1Q5TC04 95 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 Q6ZRG5 221 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 TUSC5Q8IXB3 177 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 FADS6Q8N9I5 356 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 EMG1Q92979 244 aaKnown RBP11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 NABP1Q96AH0 204 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 TMEM33P57088 247 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 Q0VFX4 171 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 RPUSD3Q6P087 351 aaKnown RBP11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 TIPARPQ7Z3E1 657 aaKnown RBP11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 MCEMP1Q8IX19 187 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 C17orf78Q8N4C9 275 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 ZNF611Q8N823 705 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 OR10AD1Q8NGE0 317 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 PP6455Q8WZ26 134 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 DEFB127Q9H1M4 99 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 C1orf123Q9NWV4 160 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 SLC2A8Q9NY64 477 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 SEMA5BQ9P283 1151 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 AMDHD2Q9Y303 409 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 UBE2J1Q9Y385 318 aaPredicted RBP11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 IL2RAP01589 272 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 LSM6P62312 80 aaKnown RBP11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 MALLQ13021 153 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 FBXW12Q6X9E4 464 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 OVCH2Q7RTZ1 564 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 CT55Q8WUE5 264 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 AKR1E2Q96JD6 320 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 ATMQ13315 3056 aa11.88□□□□□ -0.51
PRPF40B-209ENST00000548825 IGKV1-12A0A0C4DH73 117 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 TMEM218A2RU14 115 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 VAMP5O95183 116 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 IGKV1D-12P01611 117 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 SNRNP70P08621 437 aaKnown RBP11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 SELEP16581 610 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 GLP1RP43220 463 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 NPBWR1P48145 328 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 GSK3AP49840 483 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 ARF1P84077 181 aaKnown RBP11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 IZUMO4Q1ZYL8 232 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 ABHD17BQ5VST6 288 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 SPAG16Q8N0X2 631 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 IL22RA1Q8N6P7 574 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 OR6S1Q8NH40 331 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 OR51H1Q8NH63 302 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 ERGIC1Q969X5 290 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 ANGPTL4Q9BY76 406 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 ZNF700Q9H0M5 742 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 PIGMQ9H3S5 423 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 LDAHQ9H6V9 325 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 RHOFQ9HBH0 211 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 TPPPO94811 219 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 NGFP01138 241 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 SLC25A4P12235 298 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 MAGEA5P43359 124 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 LPAR6P43657 344 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 MLF1P58340 268 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 RAC3P60763 192 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 PPA1Q15181 289 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 MRPL21Q7Z2W9 205 aaKnown RBP11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 TMEM123Q8N131 208 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 OSR2Q8N2R0 312 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 DEFB123Q8N688 67 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 OR52H1Q8NGJ2 320 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 HS3ST6Q96QI5 342 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 SLC26A1Q9H2B4 701 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 FBXO7Q9Y3I1 522 aa11.87□□□□□ -0.51
PRPF40B-209ENST00000548825 TUBAL3A6NHL2 446 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 SERPINE3A8MV23 424 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 ICAM2P13598 275 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 ADH6P28332 368 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 H3F3AP84243 136 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 NHLH2Q02577 135 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 ACTBL2Q562R1 376 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 PRSS54Q6PEW0 395 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 TMPRSS7Q7RTY8 843 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 SLC7A10Q9NS82 523 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 TMEM38BQ9NVV0 291 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 F8VVB4 439 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 F8VWA3 439 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 CST7O76096 145 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 CNOT4O95628 575 aaKnown RBP11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 FGF5P12034 268 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 CNN3Q15417 329 aaKnown RBP11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 TMEM268Q5VZI3 342 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 SLC25A24Q6NUK1 477 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 ZNF100Q8IYN0 542 aa11.86□□□□□ -0.51
PRPF40B-209ENST00000548825 OR52M1Q8NGK5 317 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms