RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 ZNF66Q6ZN08 573 aa4.84□□□□□ -1.64
LIMA1-203ENST00000547825 C1orf87Q8N0U7 546 aa4.84□□□□□ -1.64
LIMA1-203ENST00000547825 PRSS35Q8N3Z0 413 aa4.84□□□□□ -1.64
LIMA1-203ENST00000547825 CCDC71LQ8N9Z2 235 aa4.84□□□□□ -1.64
LIMA1-203ENST00000547825 TMEM229BQ8NBD8 167 aa4.84□□□□□ -1.64
LIMA1-203ENST00000547825 BHLHE23Q8NDY6 225 aa4.84□□□□□ -1.64
LIMA1-203ENST00000547825 RTN4IP1Q8WWV3 396 aaPredicted RBP4.84□□□□□ -1.64
LIMA1-203ENST00000547825 LRFN5Q96NI6 719 aa4.84□□□□□ -1.64
LIMA1-203ENST00000547825 SPIN2AQ99865 258 aa4.84□□□□□ -1.64
LIMA1-203ENST00000547825 SPIN2BQ9BPZ2 258 aa4.84□□□□□ -1.64
LIMA1-203ENST00000547825 LPAR3Q9UBY5 353 aa4.84□□□□□ -1.64
LIMA1-203ENST00000547825 SERGEFQ9UGK8 458 aa4.84□□□□□ -1.64
LIMA1-203ENST00000547825 LRP12Q9Y561 859 aa4.84□□□□□ -1.64
LIMA1-203ENST00000547825 CREBBPQ92793 2442 aa4.84□□□□□ -1.64
LIMA1-203ENST00000547825 RALGAPA1Q6GYQ0 2036 aa4.84□□□□□ -1.64
LIMA1-203ENST00000547825 PRSS37A4D1T9 235 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 DVL1O14640 695 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 GEMIN2O14893 280 aaKnown RBP4.83□□□□□ -1.64
LIMA1-203ENST00000547825 GSTZ1O43708 216 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-203ENST00000547825 ACTL6AO96019 429 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 TK1P04183 234 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 RNASE1P07998 156 aaKnown RBP4.83□□□□□ -1.64
LIMA1-203ENST00000547825 FBLP22087 321 aaKnown RBP4.83□□□□□ -1.64
LIMA1-203ENST00000547825 DUSP1P28562 367 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 PMP22Q01453 160 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 LTC4SQ16873 150 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 RSPO4Q2I0M5 234 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-203ENST00000547825 MOGAT2Q3SYC2 334 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 VWA2Q5GFL6 755 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 SLC25A30Q5SVS4 291 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 ETFRF1Q6IPR1 90 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 OPN5Q6U736 354 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 ZNF600Q6ZNG1 722 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 ZNF429Q86V71 674 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 BAGE3Q86Y29 109 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 BAGE2Q86Y30 109 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 APCDD1LQ8NCL9 501 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 NPEPL1Q8NDH3 523 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 OTOSQ8NHW6 89 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 TSLPQ969D9 159 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 SLAMF6Q96DU3 332 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 ZNF681Q96N22 645 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 TXN2Q99757 166 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 FAM103A1Q9BTL3 118 aaKnown RBP4.83□□□□□ -1.64
LIMA1-203ENST00000547825 EDEM2Q9BV94 578 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 GPR61Q9BZJ8 451 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 GPR173Q9NS66 373 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 C19orf12Q9NSK7 152 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 OSGIN2Q9Y236 505 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 TRAV36DV7A0A075B6V5 113 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 FAM24AA6NFZ4 105 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 CBY3A6NI87 242 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 A8MXK9 166 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 HSD17B6O14756 317 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 SOCS1O15524 211 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 CHRM2P08172 466 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 CTLA4P16410 223 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 DAP3P51398 398 aaKnown RBP4.83□□□□□ -1.64
LIMA1-203ENST00000547825 NKAIN2Q5VXU1 208 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 CLEC18BQ6UXF7 455 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 TFAP2EQ6VUC0 442 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 IL34Q6ZMJ4 242 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 MOB3CQ70IA8 216 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 SYT13Q7L8C5 426 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 SKA3Q8IX90 412 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 OR2L13Q8N349 312 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 SLC37A2Q8TED4 501 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 TAAR8Q969N4 342 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 PIK3IP1Q96FE7 263 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 MISP3Q96FF7 219 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 OR8B4Q96RC9 309 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 TIMM29Q9BSF4 260 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 NAA11Q9BSU3 229 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-203ENST00000547825 SLC25A31Q9H0C2 315 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 ANKRD10Q9NXR5 420 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 OR5AC2Q9NZP5 309 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 IL17BQ9UHF5 180 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 ACAD8Q9UKU7 415 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 TNFSF18Q9UNG2 199 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 VSIG4Q9Y279 399 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 LIPGQ9Y5X9 500 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 AUP1Q9Y679 476 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 WSB1Q9Y6I7 421 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 A0A087WUJ7 227 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 A0A1W2PNV4 684 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 A0A1W2PP11 408 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 OR4C45A6NMZ5 311 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 H0Y8G0 127 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 GALR3O60755 368 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-203ENST00000547825 DUS4LO95620 317 aaKnown RBP4.83□□□□□ -1.64
LIMA1-203ENST00000547825 DDAH2O95865 285 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 F10P00742 488 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 HEXAP06865 529 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 IAPPP10997 89 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 MMP9P14780 707 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 ADRA2CP18825 462 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 RRADP55042 308 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 FGF8P55075 233 aaPredicted RBP4.83□□□□□ -1.64
LIMA1-203ENST00000547825 CLDN17P56750 224 aa4.83□□□□□ -1.64
LIMA1-203ENST00000547825 RAB38P57729 211 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms