RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 ST3GAL4Q11206 333 aa14.28□□□□□ -0.12
USP35-202ENST00000528910 ZNF529Q6P280 563 aa14.28□□□□□ -0.12
USP35-202ENST00000528910 METAP1DQ6UB28 335 aaPredicted RBP14.28□□□□□ -0.12
USP35-202ENST00000528910 BATF2Q8N1L9 274 aa14.28□□□□□ -0.12
USP35-202ENST00000528910 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.28□□□□□ -0.12
USP35-202ENST00000528910 TSEN15Q8WW01 171 aaKnown RBP14.28□□□□□ -0.12
USP35-202ENST00000528910 H1FXQ92522 213 aaKnown RBP14.28□□□□□ -0.12
USP35-202ENST00000528910 FAM234AQ9H0X4 552 aa14.28□□□□□ -0.12
USP35-202ENST00000528910 PRDM13Q9H4Q3 707 aa14.28□□□□□ -0.12
USP35-202ENST00000528910 SEBOXQ9HB31 216 aaPredicted RBP14.28□□□□□ -0.12
USP35-202ENST00000528910 DHDHQ9UQ10 334 aa14.28□□□□□ -0.12
USP35-202ENST00000528910 CENPVL3A0A0U1RRI6 287 aa14.27□□□□□ -0.13
USP35-202ENST00000528910 TRIM77I1YAP6 450 aa14.27□□□□□ -0.13
USP35-202ENST00000528910 M0R1W7 72 aa14.27□□□□□ -0.13
USP35-202ENST00000528910 SULT1B1O43704 296 aa14.27□□□□□ -0.13
USP35-202ENST00000528910 POU3F4P49335 361 aa14.27□□□□□ -0.13
USP35-202ENST00000528910 ASPHD2Q6ICH7 369 aa14.27□□□□□ -0.13
USP35-202ENST00000528910 BRD3OSQ6XYD6 125 aa14.27□□□□□ -0.13
USP35-202ENST00000528910 AHSA2Q719I0 299 aa14.27□□□□□ -0.13
USP35-202ENST00000528910 VMO1Q7Z5L0 202 aa14.27□□□□□ -0.13
USP35-202ENST00000528910 SERPINA12Q8IW75 414 aa14.27□□□□□ -0.13
USP35-202ENST00000528910 MKXQ8IYA7 352 aa14.27□□□□□ -0.13
USP35-202ENST00000528910 CMTM4Q8IZR5 234 aa14.27□□□□□ -0.13
USP35-202ENST00000528910 FAM216AQ8WUB2 273 aa14.27□□□□□ -0.13
USP35-202ENST00000528910 C1orf147Q96MC9 270 aaPredicted RBP14.27□□□□□ -0.13
USP35-202ENST00000528910 ZMAT3Q9HA38 289 aaKnown RBP14.27□□□□□ -0.13
USP35-202ENST00000528910 NEK6Q9HC98 313 aa14.27□□□□□ -0.13
USP35-202ENST00000528910 CHCHD3Q9NX63 227 aaKnown RBP14.27□□□□□ -0.13
USP35-202ENST00000528910 BABAM2Q9NXR7 383 aa14.27□□□□□ -0.13
USP35-202ENST00000528910 ONECUT1Q9UBC0 465 aa14.27□□□□□ -0.13
USP35-202ENST00000528910 SIRT4Q9Y6E7 314 aaPredicted RBP14.27□□□□□ -0.13
USP35-202ENST00000528910 IGHV1-69DA0A0B4J2H0 117 aa14.26□□□□□ -0.13
USP35-202ENST00000528910 DNAJC9-AS1A6NH13 148 aa14.26□□□□□ -0.13
USP35-202ENST00000528910 ZNF737O75373 536 aa14.26□□□□□ -0.13
USP35-202ENST00000528910 IGHV1-69P01742 117 aa14.26□□□□□ -0.13
USP35-202ENST00000528910 UBA52P62987 128 aaKnown RBP14.26□□□□□ -0.13
USP35-202ENST00000528910 PDZK1IP1Q13113 114 aa14.26□□□□□ -0.13
USP35-202ENST00000528910 RUSC1-AS1Q66K80 236 aa14.26□□□□□ -0.13
USP35-202ENST00000528910 DMKNQ6E0U4 476 aaPredicted RBP14.26□□□□□ -0.13
USP35-202ENST00000528910 RBMS3Q6XE24 437 aaKnown RBP14.26□□□□□ -0.13
USP35-202ENST00000528910 C1orf122Q6ZSJ8 110 aa14.26□□□□□ -0.13
USP35-202ENST00000528910 Q8N7P7 452 aa14.26□□□□□ -0.13
USP35-202ENST00000528910 GPR148Q8TDV2 347 aa14.26□□□□□ -0.13
USP35-202ENST00000528910 EMG1Q92979 244 aaKnown RBP14.26□□□□□ -0.13
USP35-202ENST00000528910 UNKLQ9H9P5 680 aaKnown RBP14.26□□□□□ -0.13
USP35-202ENST00000528910 RBFOX1Q9NWB1 397 aaKnown RBP14.26□□□□□ -0.13
USP35-202ENST00000528910 OR14J1Q9UGF5 321 aa14.26□□□□□ -0.13
USP35-202ENST00000528910 SOX21Q9Y651 276 aaPredicted RBP14.26□□□□□ -0.13
USP35-202ENST00000528910 IGKV1-12A0A0C4DH73 117 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 A0A1W2PQ09 198 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 CLDN34H7C241 214 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 K7N7A8 449 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 SPRY1O43609 319 aaPredicted RBP14.25□□□□□ -0.13
USP35-202ENST00000528910 KDM4BO94953 1096 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 CYB5AP00167 134 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 IGKV1D-12P01611 117 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 TK1P04183 234 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 OCM2P0CE71 109 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 OCMP0CE72 109 aaPredicted RBP14.25□□□□□ -0.13
USP35-202ENST00000528910 BCL3P20749 454 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 NPBWR2P48146 333 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 CAPZA1P52907 286 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 TAS2R43P59537 309 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 ZP1P60852 638 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 SPIN3Q5JUX0 258 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 RNF144BQ7Z419 303 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 SAXO1Q8IYX7 474 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 BPIFB6Q8NFQ5 453 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 OR5D14Q8NGL3 314 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 GATAD2BQ8WXI9 593 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 TNFRSF14Q92956 283 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 LHX4Q969G2 390 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 PGLYRP3Q96LB9 341 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 SPACA5Q96QH8 159 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 VCX3BQ9H321 246 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 C19orf12Q9NSK7 152 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 ZNF281Q9Y2X9 895 aa14.25□□□□□ -0.13
USP35-202ENST00000528910 TRBV5-5A0A0J9YX44 114 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 MDFIC2A0A1B0GVS7 189 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 MYL12BO14950 172 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 CD2P06729 351 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 CHRM2P08172 466 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 HCKP08631 526 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 C21orf33P30042 268 aaPredicted RBP14.24□□□□□ -0.13
USP35-202ENST00000528910 WNT4P56705 351 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 COL10A1Q03692 680 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 DOC2BQ14184 412 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 ZNF146Q15072 292 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 RNLSQ5VYX0 342 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 FIP1L1Q6UN15 594 aaKnown RBP14.24□□□□□ -0.13
USP35-202ENST00000528910 FAM58AQ8N1B3 248 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 STX19Q8N4C7 294 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 ZSCAN4Q8NAM6 433 aaPredicted RBP14.24□□□□□ -0.13
USP35-202ENST00000528910 TMEM106AQ96A25 262 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 RFT1Q96AA3 541 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 ANKRD60Q9BZ19 345 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 RHOFQ9HBH0 211 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 SIRT7Q9NRC8 400 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 TAS2R4Q9NYW5 299 aa14.24□□□□□ -0.13
USP35-202ENST00000528910 IL36RNQ9UBH0 155 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms